RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 PTPAQ15257 358 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 ECM1Q16610 540 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 MAEAQ7L5Y9 396 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 CABP7Q86V35 215 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 CALML4Q96GE6 196 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 PLIN2Q99541 437 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 NT5C3AQ9H0P0 336 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 BHMT2Q9H2M3 363 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 PADI3Q9ULW8 664 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
RPUSD3-211ENST00000464783 A0A087WZ62 844 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 GRXCR1A8MXD5 290 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 E9PMD0 336 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 TXLNAP40222 546 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 DEFB103AP81534 67 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 GRIN1Q05586 938 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 FAM109BQ6ICB4 259 aaPredicted RBP13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 ZNF410Q86VK4 478 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 KSR1Q8IVT5 923 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 MYOCDQ8IZQ8 938 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 MCPH1Q8NEM0 835 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 PHOSPHO2Q8TCD6 241 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 FDXACB1Q9BRP7 624 aaPredicted RBP13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 MMTAG2Q9BU76 263 aaKnown RBP13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 ADAMTS10Q9H324 1103 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 MSRAQ9UJ68 235 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 ST3GAL5Q9UNP4 418 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 LAMA3Q16787 3333 aa13.38□□□□□ -0.27
RPUSD3-211ENST00000464783 TCHHQ07283 1943 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 DENND3A2RUS2 1198 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 ASAP2O43150 1006 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 EYA4O95677 639 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 SRGAP2CP0DJJ0 459 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 NCLP19338 710 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 IBSPP21815 317 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 EIF4BP23588 611 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 NASPP49321 788 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 RABGGTBP53611 331 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 LAMTOR4Q0VGL1 99 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 TFDP1Q14186 410 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 MXD4Q14582 209 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 SLC39A14Q15043 492 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 RAB30Q15771 203 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 FAM102BQ5T8I3 360 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 FAM228AQ86W67 206 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 HERC6Q8IVU3 1022 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 XPNPEP1Q9NQW7 623 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 FBXO2Q9UK22 296 aaPredicted RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 CFAP45Q9UL16 551 aa13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 SRPRBQ9Y5M8 271 aaKnown RBP13.37□□□□□ -0.27
RPUSD3-211ENST00000464783 SPTLC2O15270 562 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 SLC26A4O43511 780 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 TLL1O43897 1013 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 CSDE1O75534 798 aaKnown RBP13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 UPP2O95045 317 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 YEATS4O95619 227 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 BRD1O95696 1058 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 DNAJB2P25686 324 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 PHKA2P46019 1235 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 GRB10Q13322 594 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 HYIQ5T013 277 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 TMCO2Q7Z6W1 182 aaPredicted RBP13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 KCTD17Q8N5Z5 321 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 RNF149Q8NC42 400 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 CLIC6Q96NY7 704 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 PNMA5Q96PV4 448 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 CCDC39Q9UFE4 941 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
RPUSD3-211ENST00000464783 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.35□□□□□ -0.27
RPUSD3-211ENST00000464783 ENPP3O14638 875 aa13.35□□□□□ -0.27
RPUSD3-211ENST00000464783 ZSCAN20P17040 1043 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms