RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 ST18O60284 1047 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 VCPP55072 806 aaKnown RBP19.57■□□□□ 0.72
HMGN1-209ENST00000463631 NLRP11P59045 1033 aaKnown RBP19.57■□□□□ 0.72
HMGN1-209ENST00000463631 KRT17Q04695 432 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 ECHDC2Q86YB7 292 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 ABI1Q8IZP0 508 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 CCDC12Q8WUD4 166 aaPredicted RBP19.57■□□□□ 0.72
HMGN1-209ENST00000463631 CASP10Q92851 521 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 LENG9Q96B70 501 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 IRF2BPLQ9H1B7 796 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 SPG21Q9NZD8 308 aa19.57■□□□□ 0.72
HMGN1-209ENST00000463631 CCDC196A0A1B0GTZ2 297 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 WDR64B1ANS9 1081 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-209ENST00000463631 TMOD1P28289 359 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 AVPR2P30518 371 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 KRT32Q14532 448 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 BMP2KLQ5H9B9 411 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 ZNF598Q86UK7 904 aaKnown RBP19.56■□□□□ 0.72
HMGN1-209ENST00000463631 SLC39A11Q8N1S5 342 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 RSPH1Q8WYR4 309 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 NECTIN4Q96NY8 510 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 C6orf50Q9HD87 102 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 GABBR1Q9UBS5 961 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 AKT3Q9Y243 479 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 NR2E1Q9Y466 385 aa19.56■□□□□ 0.72
HMGN1-209ENST00000463631 A0A0U1RQF3 1178 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 OATP04181 439 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 HMGB1P09429 215 aaKnown RBP19.55■□□□□ 0.72
HMGN1-209ENST00000463631 DARSP14868 501 aaKnown RBP19.55■□□□□ 0.72
HMGN1-209ENST00000463631 PBX3P40426 434 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 GPC3P51654 580 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 ITIH3Q06033 890 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 SMC1AQ14683 1233 aaKnown RBP19.55■□□□□ 0.72
HMGN1-209ENST00000463631 ADCK5Q3MIX3 580 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 TPRNQ4KMQ1 711 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 PRR16Q569H4 304 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 EFCAB12Q6NXP0 572 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 LLGL2Q6P1M3 1020 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 TMC7Q7Z402 723 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 RASEFQ8IZ41 740 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 MRPL43Q8N983 215 aaKnown RBP19.55■□□□□ 0.72
HMGN1-209ENST00000463631 MRPL9Q9BYD2 267 aaKnown RBP19.55■□□□□ 0.72
HMGN1-209ENST00000463631 HCFC2Q9Y5Z7 792 aa19.55■□□□□ 0.72
HMGN1-209ENST00000463631 C2orf71A6NGG8 1288 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 ADAMTS3O15072 1205 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 ZNF862O60290 1169 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 EOMESO95936 686 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 GNA11P29992 359 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 ADD1P35611 737 aaKnown RBP19.54■□□□□ 0.72
HMGN1-209ENST00000463631 METAP2P50579 478 aaKnown RBP eCLIP19.54■□□□□ 0.72
HMGN1-209ENST00000463631 PRKCEQ02156 737 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 UBALD2Q8IYN6 164 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 LRRC71Q8N4P6 559 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 ADAM7Q9H2U9 754 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 SORCS3Q9UPU3 1222 aa19.54■□□□□ 0.72
HMGN1-209ENST00000463631 MTMR3Q13615 1198 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 CES5AQ6NT32 575 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 ZBTB33Q86T24 672 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 RIPOR3Q96MK2 946 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 RIT2Q99578 217 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 TRAIPQ9BWF2 469 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 APOL5Q9BWW9 433 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 DISC1Q9NRI5 854 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 NRBP2Q9NSY0 501 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 SAMM50Q9Y512 469 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 PLXNA3P51805 1871 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 DENND4AQ7Z401 1863 aa19.53■□□□□ 0.72
HMGN1-209ENST00000463631 FAM186AA6NE01 2351 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 PTPRZ1P23471 2315 aaPredicted RBP19.52■□□□□ 0.72
HMGN1-209ENST00000463631 GVINP1Q7Z2Y8 2422 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 CARNS1A5YM72 827 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 TRMT1LQ7Z2T5 733 aaKnown RBP19.52■□□□□ 0.72
HMGN1-209ENST00000463631 KREMEN2Q8NCW0 462 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 BICD2Q8TD16 824 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 POMKQ9H5K3 350 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
HMGN1-209ENST00000463631 MYO15AQ9UKN7 3530 aa19.52■□□□□ 0.71
HMGN1-209ENST00000463631 MYO10Q9HD67 2058 aa19.52■□□□□ 0.71
HMGN1-209ENST00000463631 PRPF3O43395 683 aaKnown RBP19.51■□□□□ 0.71
HMGN1-209ENST00000463631 CLASP2O75122 1294 aaKnown RBP19.51■□□□□ 0.71
HMGN1-209ENST00000463631 PDGFBP01127 241 aaPredicted RBP19.51■□□□□ 0.71
HMGN1-209ENST00000463631 SFNP31947 248 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 MTHFRP42898 656 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 JAK3P52333 1124 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 TBC1D8BQ0IIM8 1120 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 TARBP2Q15633 366 aaKnown RBP19.51■□□□□ 0.71
HMGN1-209ENST00000463631 RNF169Q8NCN4 708 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 CCDC148Q8NFR7 591 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 HELQQ8TDG4 1101 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 SLC5A5Q92911 643 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 SNX27Q96L92 541 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 CHST12Q9NRB3 414 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 DZANK1Q9NVP4 752 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 CDH22Q9UJ99 828 aa19.51■□□□□ 0.71
HMGN1-209ENST00000463631 C2CD4DB7Z1M9 353 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 PROB1E7EW31 1015 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 MSH4O15457 936 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms