RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ADGRA3Q8IWK6 1321 aa18.16■□□□□ 0.5
COL1A1-202ENST00000463440 MGEA5O60502 916 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 DGKIO75912 1065 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 OR52Z1P0C646 297 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 POLGP54098 1239 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 XKR9Q5GH70 373 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 ZNF689Q96CS4 500 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 HSD17B14Q9BPX1 270 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 RC3H2Q9HBD1 1191 aaKnown RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-202ENST00000463440 PCDHB7Q9Y5E2 793 aa18.15■□□□□ 0.5
COL1A1-202ENST00000463440 GAS2O43903 313 aaKnown RBP18.14■□□□□ 0.49
COL1A1-202ENST00000463440 LPXNO60711 386 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 LYPLA2O95372 231 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 ZSCAN20P17040 1043 aaPredicted RBP18.14■□□□□ 0.49
COL1A1-202ENST00000463440 GJB2P29033 226 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 EPC2Q52LR7 807 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 ZNF410Q86VK4 478 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 RHPN2Q8IUC4 686 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 CRIPAKQ8N1N5 446 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 CCDC43Q96MW1 224 aaKnown RBP18.14■□□□□ 0.49
COL1A1-202ENST00000463440 INO80BQ9C086 356 aaPredicted RBP18.14■□□□□ 0.49
COL1A1-202ENST00000463440 DHX33Q9H6R0 707 aaKnown RBP18.14■□□□□ 0.49
COL1A1-202ENST00000463440 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 RWDD3Q9Y3V2 267 aa18.14■□□□□ 0.49
COL1A1-202ENST00000463440 COL4A4P53420 1690 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-202ENST00000463440 POTEMA6NI47 508 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 C9IYK1 514 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-202ENST00000463440 TECP42680 631 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 DSC3Q14574 896 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 MCTP1Q6DN14 999 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 CMTR2Q8IYT2 770 aaKnown RBP18.13■□□□□ 0.49
COL1A1-202ENST00000463440 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
COL1A1-202ENST00000463440 TCP11Q8WWU5 503 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 PSPC1Q8WXF1 523 aaKnown RBP18.13■□□□□ 0.49
COL1A1-202ENST00000463440 ANKEF1Q9NU02 776 aa18.13■□□□□ 0.49
COL1A1-202ENST00000463440 PRRC2BQ5JSZ5 2229 aaKnown RBP18.13■□□□□ 0.49
COL1A1-202ENST00000463440 A0A087WZ62 844 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 H3BQV1 296 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 ZBTB39O15060 712 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL1A1-202ENST00000463440 CTNNB1P35222 781 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 EMC2Q15006 297 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 ERMNQ8TAM6 284 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 CLP1Q92989 425 aaKnown RBP18.12■□□□□ 0.49
COL1A1-202ENST00000463440 NLRP4Q96MN2 994 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 FDXACB1Q9BRP7 624 aaPredicted RBP18.12■□□□□ 0.49
COL1A1-202ENST00000463440 TUFT1Q9NNX1 390 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 COL4A3BPQ9Y5P4 624 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 TRANK1O15050 2925 aa18.12■□□□□ 0.49
COL1A1-202ENST00000463440 H3BNC9 293 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 RB1P06400 928 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 XRCC6P12956 609 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL1A1-202ENST00000463440 BMPR1AP36894 532 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 FAM189BP81408 668 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 GPM6BQ13491 265 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 SKIV2LQ15477 1246 aaKnown RBP18.11■□□□□ 0.49
COL1A1-202ENST00000463440 PTPROQ16827 1216 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 TMEM143Q96AN5 459 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 MTRQ99707 1265 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 ELAC1Q9H777 363 aaKnown RBP18.11■□□□□ 0.49
COL1A1-202ENST00000463440 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 BMP2KQ9NSY1 1161 aaPredicted RBP18.11■□□□□ 0.49
COL1A1-202ENST00000463440 TMEM161AQ9NX61 479 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 RALGAPA2Q2PPJ7 1873 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 NLRC5Q86WI3 1866 aa18.11■□□□□ 0.49
COL1A1-202ENST00000463440 EYSQ5T1H1 3165 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 C5orf67F2Z3F1 127 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 ASAP2O43150 1006 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 FGFR4P22455 802 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 TOB1P50616 345 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-202ENST00000463440 NBR1Q14596 966 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 PAN2Q504Q3 1202 aaKnown RBP18.1■□□□□ 0.49
COL1A1-202ENST00000463440 KSR1Q8IVT5 923 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 PRPF31Q8WWY3 499 aaKnown RBP18.1■□□□□ 0.49
COL1A1-202ENST00000463440 C11orf84Q9BUA3 381 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-202ENST00000463440 POLR3CQ9BUI4 534 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-202ENST00000463440 PRDM6Q9NQX0 595 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 CHST12Q9NRB3 414 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 DACT1Q9NYF0 836 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 THEGQ9P2T0 379 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 GTF3C3Q9Y5Q9 886 aa18.1■□□□□ 0.49
COL1A1-202ENST00000463440 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
COL1A1-202ENST00000463440 HOXA2O43364 376 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 CSDE1O75534 798 aaKnown RBP18.09■□□□□ 0.49
COL1A1-202ENST00000463440 DGAT1O75907 488 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 LINC00271P0C7V0 271 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 SRGAP2CP0DJJ0 459 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 SPATA31C1P0DKV0 1188 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 RARRES1P49788 294 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 LAMTOR4Q0VGL1 99 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 PTGDRQ13258 359 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
COL1A1-202ENST00000463440 LARP1BQ659C4 914 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms