RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 MAFO75444 373 aaPredicted RBP9.64□□□□□ -0.87
TMEM254-208ENST00000463209 FGFR1P11362 822 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 U2AF2P26368 475 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM254-208ENST00000463209 TMOD1P28289 359 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 POLGP54098 1239 aaPredicted RBP9.64□□□□□ -0.87
TMEM254-208ENST00000463209 EMC2Q15006 297 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 IL17AQ16552 155 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 LONRF3Q496Y0 759 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 MAEAQ7L5Y9 396 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 FERMT3Q86UX7 667 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 C4orf32Q8N8J7 132 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 SLC17A8Q8NDX2 589 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 SP7Q8TDD2 431 aaPredicted RBP9.64□□□□□ -0.87
TMEM254-208ENST00000463209 ADAM2Q99965 735 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 ZSWIM4Q9H7M6 989 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
TMEM254-208ENST00000463209 INSL6Q9Y581 213 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 RALGAPA2Q2PPJ7 1873 aa9.64□□□□□ -0.87
TMEM254-208ENST00000463209 ADGRA3Q8IWK6 1321 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 IGKV6-21A0A0C4DH24 114 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 VPS37CA5D8V6 355 aaPredicted RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 SRGAP2CP0DJJ0 459 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 DARSP14868 501 aaKnown RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 CDC25AP30304 524 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 MCM2P49736 904 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 PTGDRQ13258 359 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 ECM1Q16610 540 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 CATSPER3Q86XQ3 398 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 C4orf19Q8IY42 314 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 RNF169Q8NCN4 708 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 ASAP3Q8TDY4 903 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 TGS1Q96RS0 853 aaKnown RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 HSD17B14Q9BPX1 270 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 RC3H2Q9HBD1 1191 aaKnown RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 POLD4Q9HCU8 107 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 GPRC5CQ9NQ84 441 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 XPNPEP1Q9NQW7 623 aa9.63□□□□□ -0.87
TMEM254-208ENST00000463209 MRPL42Q9Y6G3 142 aaKnown RBP9.63□□□□□ -0.87
TMEM254-208ENST00000463209 REV3LO60673 3130 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 FNDC1Q4ZHG4 1894 aaPredicted RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 TTC3P53804 2025 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 GPR182O15218 404 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 DGKIO75912 1065 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 RPLP2P05387 115 aaKnown RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 LINC00271P0C7V0 271 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 CTNNB1P35222 781 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 ERVK-21P61565 698 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 CUL4AQ13619 759 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 BTG3Q14201 252 aaPredicted RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 DSC3Q14574 896 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 EPC2Q52LR7 807 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 LARP1BQ659C4 914 aaKnown RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 NPAS4Q8IUM7 802 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 PRPF31Q8WWY3 499 aaKnown RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 SLC7A3Q8WY07 619 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 CCDC43Q96MW1 224 aaKnown RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 MTRQ99707 1265 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 DHX33Q9H6R0 707 aaKnown RBP9.62□□□□□ -0.87
TMEM254-208ENST00000463209 MINDY3Q9H8M7 445 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 RGS18Q9NS28 235 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 COL4A3BPQ9Y5P4 624 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 MTCH2Q9Y6C9 303 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 SQORQ9Y6N5 450 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 TRANK1O15050 2925 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 PLXNA4Q9HCM2 1894 aa9.62□□□□□ -0.87
TMEM254-208ENST00000463209 TBKBP1A7MCY6 615 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 C9IYK1 514 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 CCT6AP40227 531 aaKnown RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 RFC5P40937 340 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 TRAPPC10P48553 1259 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 SARSP49591 514 aaKnown RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 RARRES1P49788 294 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 DNM2P50570 870 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 LAMTOR4Q0VGL1 99 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 SKIV2LQ15477 1246 aaKnown RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 ZRSR1Q15695 479 aaKnown RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 FAM173BQ6P4H8 233 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 OTUD6AQ7L8S5 288 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 FIBCD1Q8N539 461 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 LPPQ93052 612 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 ZNF689Q96CS4 500 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 PLIN2Q99541 437 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 FTHL17Q9BXU8 183 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 GCOM2Q9BZD3 368 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 POLR3FQ9H1D9 316 aaPredicted RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 ATP6V0A4Q9HBG4 840 aa9.61□□□□□ -0.87
TMEM254-208ENST00000463209 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.61□□□□□ -0.87
TMEM254-208ENST00000463209 PIN4Q9Y237 131 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms