RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
COL4A6-204ENST00000461897 LRRC53A6NM62 1247 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 AKR1B10O60218 316 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 PHACTR2O75167 634 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 EYA4O95677 639 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 NR3C2P08235 984 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 EPB41P11171 864 aaKnown RBP13.62□□□□□ -0.23
COL4A6-204ENST00000461897 IRX3P78415 501 aaPredicted RBP13.62□□□□□ -0.23
COL4A6-204ENST00000461897 NNTQ13423 1086 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 EPHA7Q15375 998 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 VSIG10LQ86VR7 867 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 TPH2Q8IWU9 490 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 ZC3H3Q8IXZ2 948 aaKnown RBP13.62□□□□□ -0.23
COL4A6-204ENST00000461897 KCTD17Q8N5Z5 321 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 CHST13Q8NET6 341 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 CAVIN3Q969G5 261 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 TSG101Q99816 390 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 FGFBP2Q9BYJ0 223 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 MAF1Q9H063 256 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 RASSF4Q9H2L5 321 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 BHMT2Q9H2M3 363 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 BMP2KQ9NSY1 1161 aaPredicted RBP13.62□□□□□ -0.23
COL4A6-204ENST00000461897 CEP72Q9P209 647 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 ASTN1O14525 1302 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
COL4A6-204ENST00000461897 TESPA1A2RU30 521 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 ATP9AO75110 1047 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 CNMDO75829 334 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 MOCS3O95396 460 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 MUTP22033 750 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 CCND2P30279 289 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 MAGEA1P43355 309 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 EPHB4P54760 987 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 RIOX2Q8IUF8 465 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 NSUN6Q8TEA1 469 aaKnown RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 SMCR8Q8TEV9 937 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 LXNQ9BS40 222 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 RUSC1Q9BVN2 902 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 TLR10Q9BXR5 811 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 SPATC1LQ9H0A9 340 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 ZNF408Q9H9D4 720 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 FAM207AQ9NSI2 230 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 GOLGA6BA6NDN3 693 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 GOLGA8KD6RF30 607 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 ZBTB39O15060 712 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 RGS20O76081 388 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 GNA14O95837 355 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 GIT2Q14161 759 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 FAM26FQ5R3K3 315 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 ALS2CLQ60I27 953 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 GPAT2Q6NUI2 795 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 RRAGAQ7L523 313 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 INPP4AQ96PE3 977 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 DEF6Q9H4E7 631 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 MMRN2Q9H8L6 949 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
COL4A6-204ENST00000461897 COL4A3BPQ9Y5P4 624 aa13.61□□□□□ -0.23
COL4A6-204ENST00000461897 ZMYND10O75800 440 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
COL4A6-204ENST00000461897 LRRC41Q15345 812 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 KLHDC7AQ5VTJ3 777 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 MIER3Q7Z3K6 550 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 FAM76AQ8TAV0 307 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 NEK9Q8TD19 979 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 NOX5Q96PH1 765 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 PAGR1Q9BTK6 254 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 LRRC1Q9BTT6 524 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 R3HDMLQ9H3Y0 253 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 TBC1D22BQ9NU19 505 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 STIM2Q9P246 746 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 SALL4Q9UJQ4 1053 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 MYH10P35580 1976 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 DOCK5Q9H7D0 1870 aa13.6□□□□□ -0.23
COL4A6-204ENST00000461897 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 NOL4O94818 638 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 SERPING1P05155 500 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 RINT1Q6NUQ1 792 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 NFRKBQ6P4R8 1299 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 FOXR1Q6PIV2 292 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 GSPT2Q8IYD1 628 aaKnown RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 MOV10L1Q9BXT6 1211 aaKnown RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 TXNRD2Q9NNW7 524 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 TBC1D7Q9P0N9 293 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 WDR81Q562E7 1941 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms