RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 DNAAF4Q8WXU2 420 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 PAGR1Q9BTK6 254 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 IL23AQ9NPF7 189 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 PCDHA11Q9Y5I1 949 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 BPTFQ12830 3046 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 FRYQ5TBA9 3013 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 ASH1LQ9NR48 2969 aaKnown RBP6.58□□□□□ -1.36
SPTA1-202ENST00000461624 ZNFX1Q9P2E3 1918 aaKnown RBP6.58□□□□□ -1.36
SPTA1-202ENST00000461624 CDK5RAP2Q96SN8 1893 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 PTPRSQ13332 1948 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 DCXO43602 365 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
SPTA1-202ENST00000461624 GLRX3O76003 335 aaKnown RBP6.57□□□□□ -1.36
SPTA1-202ENST00000461624 KRT37O76014 449 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 CELA3AP09093 270 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 CTSHP09668 335 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 CDK7P50613 346 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 RHBDL3P58872 404 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 RPS26P62854 115 aaKnown RBP6.57□□□□□ -1.36
SPTA1-202ENST00000461624 TCF15Q12870 199 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 PWP1Q13610 501 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 TAF7LQ5H9L4 462 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 PRAMEF19Q5SWL8 479 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 BEND3Q5T5X7 828 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 CCSAPQ6IQ19 270 aaPredicted RBP6.57□□□□□ -1.36
SPTA1-202ENST00000461624 TTBK2Q6IQ55 1244 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 CCDC174Q6PII3 467 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 ERMP1Q7Z2K6 904 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 GRIN3AQ8TCU5 1115 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 ZNF384Q8TF68 577 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 KRTAP4-2Q9BYR5 136 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 DNAJC18Q9H819 358 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 BTBD7Q9P203 1132 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 MAPK8IP1Q9UQF2 711 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 MYO7AQ13402 2215 aa6.57□□□□□ -1.36
SPTA1-202ENST00000461624 ASPMQ8IZT6 3477 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 FOCADQ5VW36 1801 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-202ENST00000461624 DBX1A6NMT0 343 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 DCDC2CA8MYV0 355 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 C19orf81C9J6K1 198 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 PAGE1O75459 146 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 PGK1P00558 417 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 ADORA2AP29274 412 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 ACLYP53396 1101 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 GNAI1P63096 354 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 CCNA1P78396 465 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 IKZF1Q13422 519 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 PKN1Q16512 942 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 LEXMQ3ZCV2 418 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 METTL16Q86W50 562 aaKnown RBP6.56□□□□□ -1.36
SPTA1-202ENST00000461624 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-202ENST00000461624 RUNDC1Q96C34 613 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 C12orf42Q96LP6 360 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 CHMP4AQ9BY43 222 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.56□□□□□ -1.36
SPTA1-202ENST00000461624 AS3MTQ9HBK9 375 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 XPNPEP3Q9NQH7 507 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 NRBP1Q9UHY1 535 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 SPEGQ15772 3267 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 OTOGLQ3ZCN5 2332 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 NBEAQ8NFP9 2946 aa6.56□□□□□ -1.36
SPTA1-202ENST00000461624 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 UMODL1Q5DID0 1318 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 GRM8O00222 908 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 LRIG2O94898 1065 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 EOMESO95936 686 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 CD4P01730 458 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 CA3P07451 260 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 IL9P15248 144 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 VAMP1P23763 118 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 CYP2C18P33260 490 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 ZP2Q05996 745 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 GRB10Q13322 594 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 PICALMQ13492 652 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
SPTA1-202ENST00000461624 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 RABL6Q3YEC7 729 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-202ENST00000461624 C22orf34Q6ZV56 151 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 ARMCX6Q7L4S7 300 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 UBE3DQ7Z6J8 389 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 C12orf40Q86WS4 652 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 ZSWIM9Q86XI8 627 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 CCAR1Q8IX12 1150 aaKnown RBP6.55□□□□□ -1.36
SPTA1-202ENST00000461624 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 TMEM199Q8N511 208 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 KLHDC9Q8NEP7 349 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 BHLHE22Q8NFJ8 381 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-202ENST00000461624 ELMO3Q96BJ8 720 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 FOXQ1Q9C009 403 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 FAM53CQ9NYF3 392 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 TMOD4Q9NZQ9 345 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 LMCD1Q9NZU5 365 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 PCDHA4Q9UN74 947 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 TET1Q8NFU7 2136 aa6.55□□□□□ -1.36
SPTA1-202ENST00000461624 DSPP15924 2871 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms