RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MTMR3Q13615 1198 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 PAN2Q504Q3 1202 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 SYCE2Q6PIF2 218 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 B3GNT9Q6UX72 402 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 NME8Q8N427 588 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 OXER1Q8TDS5 423 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 WASF1Q92558 559 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 PCYT2Q99447 389 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 UPF2Q9HAU5 1272 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 NR2E1Q9Y466 385 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 PCDHA2Q9Y5H9 948 aa15.44■□□□□ 0.06
SCAMP4-206ENST00000460767 SMIM35A0A1B0GVV1 85 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 CCNE2O96020 404 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 PDGFBP01127 241 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 SP4Q02446 784 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 Q4G0T1 1027 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 EARS2Q5JPH6 523 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 CCDC83Q8IWF9 413 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 NECTIN4Q96NY8 510 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 CELF4Q9BZC1 486 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 JPH1Q9HDC5 661 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 LRFN2Q9ULH4 789 aa15.43■□□□□ 0.06
SCAMP4-206ENST00000460767 PER2O15055 1255 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 INSRRP14616 1297 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 LAG3P18627 525 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 MARK3P27448 753 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 ERVFC1P60507 584 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 RBM10P98175 930 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 ODR4Q5SWX8 454 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 KRT25Q7Z3Z0 450 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 PLA2G4DQ86XP0 818 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 TMEM105Q8N8V8 129 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 COLGALT1Q8NBJ5 622 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 KREMEN2Q8NCW0 462 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 MICAL1Q8TDZ2 1067 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 GLG1Q92896 1179 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 SLC5A5Q92911 643 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 NGRNQ9NPE2 291 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 RGS18Q9NS28 235 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 SLC9A2Q9UBY0 812 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 TRPC6Q9Y210 931 aa15.42■□□□□ 0.06
SCAMP4-206ENST00000460767 C9IYK1 514 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 MSH4O15457 936 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 MCM2P49736 904 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 GATMP50440 423 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 HMGN5P82970 282 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ITIH3Q06033 890 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 NR5A1Q13285 461 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 PPP4R3AQ6IN85 833 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ABHD15Q6UXT9 468 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 SLC24A5Q71RS6 500 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ZBTB33Q86T24 672 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ETNPPLQ8TBG4 499 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 MRPS27Q92552 414 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 FAM49AQ9H0Q0 323 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ELAC1Q9H777 363 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ERVK-5Q9HDB9 667 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 PCDHB7Q9Y5E2 793 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 DENND4AQ7Z401 1863 aa15.41■□□□□ 0.06
SCAMP4-206ENST00000460767 ZFHX2Q9C0A1 2572 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 BRD1O95696 1058 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 XBP1P17861 261 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 TECP42680 631 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 SLC26A2P50443 739 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 CLCN5P51795 746 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 ACTR2P61160 394 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 KRT76Q01546 638 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 ASTLQ6HA08 431 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 PLPPR4Q7Z2D5 763 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 THNSL1Q8IYQ7 743 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 FBXO18Q8NFZ0 1043 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 CASP10Q92851 521 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 NKD2Q969F2 451 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 CWH43Q9H720 699 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 KCNMB3Q9NPA1 279 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 TBC1D22BQ9NU19 505 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 TMEM161AQ9NX61 479 aa15.4■□□□□ 0.06
SCAMP4-206ENST00000460767 FAM186AA6NE01 2351 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 FAM205CA6NFA0 338 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 MGEA5O60502 916 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 PSMD10O75832 226 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 TDP2O95551 362 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 PPM1AP35813 382 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 ID4P47928 161 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 CUL4AQ13619 759 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 NONOQ15233 471 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■■□□ 18.6
SCAMP4-206ENST00000460767 INF2Q27J81 1249 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 PRR16Q569H4 304 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 ZNF746Q6NUN9 644 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 ZDHHC14Q8IZN3 488 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 RIT2Q99578 217 aa15.39■□□□□ 0.05
SCAMP4-206ENST00000460767 TCF25Q9BQ70 676 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms