RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 BTG3Q14201 252 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-213ENST00000460048 SLC24A5Q71RS6 500 aa18.47■□□□□ 0.55
SHANK2-213ENST00000460048 ZNF579Q8NAF0 562 aaKnown RBP18.47■□□□□ 0.55
SHANK2-213ENST00000460048 EIF2AK1Q9BQI3 630 aaKnown RBP18.47■□□□□ 0.55
SHANK2-213ENST00000460048 JPH2Q9BR39 696 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-213ENST00000460048 TMEM60Q9H2L4 133 aa18.47■□□□□ 0.55
SHANK2-213ENST00000460048 ZSWIM4Q9H7M6 989 aa18.47■□□□□ 0.55
SHANK2-213ENST00000460048 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-213ENST00000460048 RWDD3Q9Y3V2 267 aa18.47■□□□□ 0.55
SHANK2-213ENST00000460048 PLXNA4Q9HCM2 1894 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 CD2BP2O95400 341 aaKnown RBP18.46■□□□□ 0.55
SHANK2-213ENST00000460048 RB1P06400 928 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 YWHABP31946 246 aaKnown RBP18.46■□□□□ 0.55
SHANK2-213ENST00000460048 BMPR1AP36894 532 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 TXKP42681 527 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 DNM2P50570 870 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 GPM6BQ13491 265 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 CTTNQ14247 550 aaKnown RBP18.46■□□□□ 0.55
SHANK2-213ENST00000460048 CEP170P1Q96L14 293 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 TBC1D32Q96NH3 1257 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 HSD17B14Q9BPX1 270 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 DHX33Q9H6R0 707 aaKnown RBP18.46■□□□□ 0.55
SHANK2-213ENST00000460048 SUCLA2Q9P2R7 463 aaPredicted RBP18.46■□□□□ 0.55
SHANK2-213ENST00000460048 LRFN2Q9ULH4 789 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 PCDHB7Q9Y5E2 793 aa18.46■□□□□ 0.55
SHANK2-213ENST00000460048 TCF20Q9UGU0 1960 aaKnown RBP18.45■□□□□ 0.54
SHANK2-213ENST00000460048 ZBTB39O15060 712 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 LYPLA2O95372 231 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 MCM7P33993 719 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 CTNNB1P35222 781 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 GATMP50440 423 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 CYP4A11Q02928 519 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 ORC2Q13416 577 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-213ENST00000460048 TJAP1Q5JTD0 557 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 OTUD6AQ7L8S5 288 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 ZNF410Q86VK4 478 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 NEK9Q8TD19 979 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 NLRP7Q8WX94 980 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 MRPL38Q96DV4 380 aaKnown RBP18.45■□□□□ 0.54
SHANK2-213ENST00000460048 ASB2Q96Q27 587 aa18.45■□□□□ 0.54
SHANK2-213ENST00000460048 ELAC1Q9H777 363 aaKnown RBP18.45■□□□□ 0.54
SHANK2-213ENST00000460048 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-213ENST00000460048 MRPL42Q9Y6G3 142 aaKnown RBP18.45■□□□□ 0.54
SHANK2-213ENST00000460048 VCANP13611 3396 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 A0A087WZ62 844 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 ATP2B1P20020 1258 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 U2AF2P26368 475 aaKnown RBP eCLIP18.44■□□□□ 0.54
SHANK2-213ENST00000460048 RFC5P40937 340 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 MRPS5P82675 430 aaKnown RBP18.44■□□□□ 0.54
SHANK2-213ENST00000460048 NOSTRINQ8IVI9 506 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 TPH2Q8IWU9 490 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 EXOC8Q8IYI6 725 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 SLC7A3Q8WY07 619 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 SCLT1Q96NL6 688 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 FDXACB1Q9BRP7 624 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-213ENST00000460048 GCOM2Q9BZD3 368 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-213ENST00000460048 TMEM161AQ9NX61 479 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 BRWD1Q9NSI6 2320 aa18.44■□□□□ 0.54
SHANK2-213ENST00000460048 MYO7AQ13402 2215 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 FGFR4P22455 802 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 POLGP54098 1239 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-213ENST00000460048 SKIV2LQ15477 1246 aaKnown RBP18.43■□□□□ 0.54
SHANK2-213ENST00000460048 PTPROQ16827 1216 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 PAN2Q504Q3 1202 aaKnown RBP18.43■□□□□ 0.54
SHANK2-213ENST00000460048 RHPN2Q8IUC4 686 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 KSR1Q8IVT5 923 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 C11orf84Q9BUA3 381 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-213ENST00000460048 PLVAPQ9BX97 442 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 COG5Q9UP83 839 aa18.43■□□□□ 0.54
SHANK2-213ENST00000460048 XIRP2A4UGR9 3374 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 POTEMA6NI47 508 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 GAS2O43903 313 aaKnown RBP18.42■□□□□ 0.54
SHANK2-213ENST00000460048 CSDE1O75534 798 aaKnown RBP18.42■□□□□ 0.54
SHANK2-213ENST00000460048 ZSCAN20P17040 1043 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-213ENST00000460048 TRAPPC10P48553 1259 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 ZNF174Q15697 407 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 XKR9Q5GH70 373 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 TTC38Q5R3I4 469 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 FAM102BQ5T8I3 360 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 SYMPKQ92797 1274 aaKnown RBP18.42■□□□□ 0.54
SHANK2-213ENST00000460048 P2RX5Q93086 422 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 INO80BQ9C086 356 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-213ENST00000460048 LMAN2LQ9H0V9 348 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 IFT122Q9HBG6 1241 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 ANKEF1Q9NU02 776 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 RNF19AQ9NV58 838 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
SHANK2-213ENST00000460048 SPTBN5Q9NRC6 3674 aaKnown RBP18.42■□□□□ 0.54
SHANK2-213ENST00000460048 GRM6O15303 877 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 SPATA31C1P0DKV0 1188 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 IBSPP21815 317 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-213ENST00000460048 MCM2P49736 904 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 TFF2Q03403 129 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
SHANK2-213ENST00000460048 EMC2Q15006 297 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 NAALADL2Q58DX5 795 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 ECHDC2Q86YB7 292 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms