RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 FAM187AA6NFU0 413 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 SLFN14P0C7P3 912 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 YBX3P16989 372 aaKnown RBP eCLIP10.46□□□□□ -0.738e-15■□□□□ 11
UFD1-205ENST00000459854 PSMD2Q13200 908 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 TMED2Q15363 201 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 CCDC117Q8IWD4 279 aaPredicted RBP10.46□□□□□ -0.73
UFD1-205ENST00000459854 DYDC2Q96IM9 177 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 PLEKHA4Q9H4M7 779 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 NHEJ1Q9H9Q4 299 aaPredicted RBP10.46□□□□□ -0.73
UFD1-205ENST00000459854 PPCSQ9HAB8 311 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 TRIM33Q9UPN9 1127 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 EXOC1LA0A1B0GW35 172 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 GNGT2O14610 69 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 KRT8P05787 483 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 ABCD1P33897 745 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 EXOC3L4Q17RC7 722 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 DPCR1Q3MIW9 517 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 NCAPH2Q6IBW4 605 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 KIAA2013Q8IYS2 634 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 FAM151AQ8WW52 585 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 ZNF711Q9Y462 761 aa10.46□□□□□ -0.73
UFD1-205ENST00000459854 POC1B-GALNT4F8VUJ3 575 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 ENC1O14682 589 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 HMGB3O15347 200 aaKnown RBP10.46□□□□□ -0.74
UFD1-205ENST00000459854 KRT10P13645 584 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 CDC42EP5Q6NZY7 148 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 NUDCD3Q8IVD9 361 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 P2RX5Q93086 422 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 BLZF1Q9H2G9 400 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 SLITRK6Q9H5Y7 841 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 ANLNQ9NQW6 1124 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 ARL2BPQ9Y2Y0 163 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 RREB1Q92766 1687 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 FZD9O00144 591 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 STAM2O75886 525 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 GCNT3O95395 438 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 IFNB1P01574 187 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 FGAP02671 866 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 KPNB1Q14974 876 aaKnown RBP10.46□□□□□ -0.74
UFD1-205ENST00000459854 NEK8Q86SG6 692 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 SLFN12Q8IYM2 578 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 MTRQ99707 1265 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 DIABLOQ9NR28 239 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 HERC5Q9UII4 1024 aaKnown RBP10.46□□□□□ -0.74
UFD1-205ENST00000459854 TRAF3IP3Q9Y228 551 aa10.46□□□□□ -0.74
UFD1-205ENST00000459854 SCG2P13521 617 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 CACNB3P54284 484 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 SGO2Q562F6 1265 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 PCGF5Q86SE9 256 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 PALD1Q9ULE6 856 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 ABT1Q9ULW3 272 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 DDAH1O94760 285 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 SNUPNO95149 360 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 YWHAGP61981 247 aaKnown RBP eCLIP10.45□□□□□ -0.74
UFD1-205ENST00000459854 CDC37Q16543 378 aaPredicted RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 MYCT1Q8N699 235 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 FAM163AQ96GL9 167 aaPredicted RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 COL4A3BPQ9Y5P4 624 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 BCORQ6W2J9 1755 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 PDHA1P08559 390 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 MDH1P40925 334 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 PDE1BQ01064 536 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 SF3A3Q12874 501 aaKnown RBP eCLIP10.45□□□□□ -0.74
UFD1-205ENST00000459854 KRR1Q13601 381 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 PKP1Q13835 747 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 ABCB5Q2M3G0 1257 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 AGBL2Q5U5Z8 902 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 C1orf146Q5VVC0 180 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 LRRC8BQ6P9F7 803 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 BZW1Q7L1Q6 419 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 TERB1Q8NA31 727 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 SCYL1Q96KG9 808 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 TSC22D4Q9Y3Q8 395 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 MYO1FO00160 1098 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 GGPS1O95749 300 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 RXRAP19793 462 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 CA4P22748 312 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 MFAP3P55082 362 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 KLHL38Q2WGJ6 581 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 DNAL1Q4LDG9 190 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 CEP55Q53EZ4 464 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 BEND6Q5SZJ8 279 aaPredicted RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 SUGP1Q8IWZ8 645 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 MAP4K1Q92918 833 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 EHD2Q9NZN4 543 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 FAM8A1Q9UBU6 413 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 NFU1Q9UMS0 254 aa10.45□□□□□ -0.74
UFD1-205ENST00000459854 COPG1Q9Y678 874 aaKnown RBP10.45□□□□□ -0.74
UFD1-205ENST00000459854 SOWAHDA6NJG2 315 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 CHMP2AO43633 222 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 KRT37O76014 449 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 GSTA1P08263 222 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 ABCB4P21439 1286 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 HSPA13P48723 471 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms