RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PACSIN2Q9UNF0 486 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 LOXHD1Q8IVV2 1947 aa20.05■□□□□ 0.8
SEMA3B-209ENST00000456560 ARHGEF35A5YM69 484 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 CES2O00748 559 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 DHX15O43143 795 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 FLOT1O75955 427 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 C8orf74Q6P047 294 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 NIPA1Q7RTP0 329 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 SLC9A9Q8IVB4 645 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 LRRC57Q8N9N7 239 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 PHF20L1A8MW92 1017 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 DDX3XO00571 662 aaKnown RBP eCLIP20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 HIP1RO75146 1068 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 RNF40O75150 1001 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 STAT1P42224 750 aa20.04■□□□□ 0.8
SEMA3B-209ENST00000456560 GFPT2O94808 682 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 GGCXP38435 758 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 PPP2R5AQ15172 486 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 NBPF9Q3BBW0 867 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 SND1Q7KZF4 910 aaKnown RBP eCLIP20.03■□□□□ 0.82e-8■■■□□ 18.2
SEMA3B-209ENST00000456560 IL31RAQ8NI17 732 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 SLC30A5Q8TAD4 765 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 ZNF341Q9BYN7 854 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 STK33Q9BYT3 514 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 KCNH7Q9NS40 1196 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 INTUQ9ULD6 942 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 NFIBO00712 420 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 WNT10BO00744 389 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 RPS6KA5O75582 802 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 CYP2J2P51589 502 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 EPHB4P54760 987 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 MYBPC2Q14324 1141 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 IFI16Q16666 785 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 PADI6Q6TGC4 694 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 MIER3Q7Z3K6 550 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 SPON1Q9HCB6 807 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 GDF3Q9NR23 364 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 FRMD4BQ9Y2L6 1034 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 UBIAD1Q9Y5Z9 338 aa20.03■□□□□ 0.8
SEMA3B-209ENST00000456560 MYH11P35749 1972 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 A0A0A6YYK5 440 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 DDX39AO00148 427 aaKnown RBP20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 KIF4AO95239 1232 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 ZBTB48P10074 688 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 SOX5P35711 763 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 RPS6KA1Q15418 735 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 DALRD3Q5D0E6 543 aaKnown RBP20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 EMBQ6PCB8 327 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 VPS36Q86VN1 386 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 DNAAF5Q86Y56 855 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 NIM1KQ8IY84 436 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 PRPF38AQ8NAV1 312 aaKnown RBP20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 TPCN2Q8NHX9 752 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 CAVIN3Q969G5 261 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 HOOK2Q96ED9 719 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 TMEM59LQ9UK28 342 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 BCS1LQ9Y276 419 aa20.02■□□□□ 0.8
SEMA3B-209ENST00000456560 F8VZ95 297 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 P4HBP07237 508 aaKnown RBP20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 H2AFZP0C0S5 128 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 DNA2P51530 1060 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 CXCL9Q07325 125 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 CBWD6Q4V339 395 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 CBWD3Q5JTY5 395 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 CBWD5Q5RIA9 395 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 H2AFVQ71UI9 128 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 SLFN11Q7Z7L1 901 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 GPR88Q9GZN0 384 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 FAM204AQ9H8W3 233 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 AGO4Q9HCK5 861 aaKnown RBP20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 DNAJC12Q9UKB3 198 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 CD2APQ9Y5K6 639 aa20.02■□□□□ 0.79
SEMA3B-209ENST00000456560 WDR46O15213 610 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 EVI5O60447 810 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 MAPTP10636 758 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 ITGB3BPQ13352 177 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 TKFCQ3LXA3 575 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 FOXR1Q6PIV2 292 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 MCF2L2Q86YR7 1114 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 GOLGA6L1Q8N7Z2 621 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 USP38Q8NB14 1042 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 LNX1Q8TBB1 728 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 RIN2Q8WYP3 895 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 TAF4BQ92750 862 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 PBKQ96KB5 322 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 SYT11Q9BT88 431 aa20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 INTS2Q9H0H0 1204 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-209ENST00000456560 GLI1P08151 1106 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 NOP2P46087 812 aaKnown RBP20■□□□□ 0.79
SEMA3B-209ENST00000456560 DRAP1Q14919 205 aaPredicted RBP20■□□□□ 0.79
SEMA3B-209ENST00000456560 PCNX4Q63HM2 1172 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 IFT20Q8IY31 132 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 TMEM174Q8WUU8 243 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 PKD2L1Q9P0L9 805 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 RSPH14Q9UHP6 348 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 STXBP5LQ9Y2K9 1186 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 DAAM1Q9Y4D1 1078 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 ZHX2Q9Y6X8 837 aa20■□□□□ 0.79
SEMA3B-209ENST00000456560 LYPLA2O95372 231 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms