RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 CLLU1OSQ5K130 101 aa21.15■□□□□ 0.98
MSH6-206ENST00000455383 ZNF598Q86UK7 904 aaKnown RBP21.15■□□□□ 0.98
MSH6-206ENST00000455383 MAP7D2Q96T17 732 aa21.15■□□□□ 0.98
MSH6-206ENST00000455383 SPG21Q9NZD8 308 aa21.15■□□□□ 0.98
MSH6-206ENST00000455383 A0A0U1RQF3 1178 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 EDIL3O43854 480 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 ZNF862O60290 1169 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 PBX3P40426 434 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.97
MSH6-206ENST00000455383 KRT17Q04695 432 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 BMP2KLQ5H9B9 411 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 LLGL2Q6P1M3 1020 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 REXO1Q8N1G1 1221 aaKnown RBP21.14■□□□□ 0.97
MSH6-206ENST00000455383 SLC39A11Q8N1S5 342 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 LRRC71Q8N4P6 559 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 MRPL43Q8N983 215 aaKnown RBP21.14■□□□□ 0.97
MSH6-206ENST00000455383 CASP10Q92851 521 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 APOL5Q9BWW9 433 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 C6orf50Q9HD87 102 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 AKT3Q9Y243 479 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 USP34Q70CQ2 3546 aa21.14■□□□□ 0.97
MSH6-206ENST00000455383 NID2Q14112 1375 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 C2orf71A6NGG8 1288 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 EOMESO95936 686 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 DARSP14868 501 aaKnown RBP21.13■□□□□ 0.97
MSH6-206ENST00000455383 TMOD1P28289 359 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 GPC3P51654 580 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 NUBP1P53384 320 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 KRT32Q14532 448 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 PRR16Q569H4 304 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 TRMT1LQ7Z2T5 733 aaKnown RBP21.13■□□□□ 0.97
MSH6-206ENST00000455383 TMC7Q7Z402 723 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 ABI1Q8IZP0 508 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 CCDC12Q8WUD4 166 aaPredicted RBP21.13■□□□□ 0.97
MSH6-206ENST00000455383 ADAM7Q9H2U9 754 aa21.13■□□□□ 0.97
MSH6-206ENST00000455383 WDR81Q562E7 1941 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 CCDC196A0A1B0GTZ2 297 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 WDR64B1ANS9 1081 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 PRPF3O43395 683 aaKnown RBP21.12■□□□□ 0.97
MSH6-206ENST00000455383 ST18O60284 1047 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 OATP04181 439 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 HMGB1P09429 215 aaKnown RBP21.12■□□□□ 0.97
MSH6-206ENST00000455383 SMC1AQ14683 1233 aaKnown RBP21.12■□□□□ 0.97
MSH6-206ENST00000455383 RIPOR3Q96MK2 946 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 NRBP2Q9NSY0 501 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 TCEAL9Q9UHQ7 104 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 HCFC2Q9Y5Z7 792 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 CACNA1HO95180 2353 aa21.12■□□□□ 0.97
MSH6-206ENST00000455383 CLASP2O75122 1294 aaKnown RBP21.11■□□□□ 0.97
MSH6-206ENST00000455383 GNA11P29992 359 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 METAP2P50579 478 aaKnown RBP eCLIP21.11■□□□□ 0.97
MSH6-206ENST00000455383 ITIH3Q06033 890 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 TARBP2Q15633 366 aaKnown RBP21.11■□□□□ 0.97
MSH6-206ENST00000455383 TPRNQ4KMQ1 711 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 NECTIN4Q96NY8 510 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 IRF2BPLQ9H1B7 796 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 DISC1Q9NRI5 854 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 CDH22Q9UJ99 828 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 NR2E1Q9Y466 385 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 SAMM50Q9Y512 469 aa21.11■□□□□ 0.97
MSH6-206ENST00000455383 MSH4O15457 936 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 PDGFBP01127 241 aaPredicted RBP21.1■□□□□ 0.97
MSH6-206ENST00000455383 PRKCEQ02156 737 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 UGCGQ16739 394 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 KREMEN2Q8NCW0 462 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 KCNB2Q92953 911 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 ZNF668Q96K58 619 aaPredicted RBP21.1■□□□□ 0.97
MSH6-206ENST00000455383 RIT2Q99578 217 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 TRAIPQ9BWF2 469 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 POMKQ9H5K3 350 aa21.1■□□□□ 0.97
MSH6-206ENST00000455383 C2CD4DB7Z1M9 353 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 CES5AQ6NT32 575 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 UBALD2Q8IYN6 164 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 HELQQ8TDG4 1101 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 RSPH1Q8WYR4 309 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 SLC5A5Q92911 643 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 CEP89Q96ST8 783 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 MRPL9Q9BYD2 267 aaKnown RBP21.09■□□□□ 0.97
MSH6-206ENST00000455383 DACT1Q9NYF0 836 aa21.09■□□□□ 0.97
MSH6-206ENST00000455383 FGFR4P22455 802 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 SP100P23497 879 aaPredicted RBP21.08■□□□□ 0.97
MSH6-206ENST00000455383 SFNP31947 248 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 BCAR1P56945 870 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 NTRK3Q16288 839 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 ZBTB33Q86T24 672 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 FBXL16Q8N461 479 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 RNF169Q8NCN4 708 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 BICD2Q8TD16 824 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 NIFKQ9BYG3 293 aaKnown RBP21.08■□□□□ 0.97
MSH6-206ENST00000455383 CHST12Q9NRB3 414 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 FAM86C1Q9NVL1 165 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 SORCS3Q9UPU3 1222 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 IRAK3Q9Y616 596 aa21.08■□□□□ 0.97
MSH6-206ENST00000455383 IGKV6-21A0A0C4DH24 114 aa21.07■□□□□ 0.96
MSH6-206ENST00000455383 STBD1O95210 358 aa21.07■□□□□ 0.96
MSH6-206ENST00000455383 BRD1O95696 1058 aa21.07■□□□□ 0.96
MSH6-206ENST00000455383 MTHFRP42898 656 aa21.07■□□□□ 0.96
MSH6-206ENST00000455383 USP11P51784 963 aa21.07■□□□□ 0.96
MSH6-206ENST00000455383 JAK3P52333 1124 aa21.07■□□□□ 0.96
MSH6-206ENST00000455383 CDC42EP1Q00587 391 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms