RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF577Q9BSK1 485 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CEP131Q9UPN4 1083 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 POLR2DO15514 142 aaKnown RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 NOL4O94818 638 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 GLRA2P23416 452 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 SLC26A2P50443 739 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 STX1AQ16623 288 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CPLX2Q6PUV4 134 aaKnown RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 RUFY4Q6ZNE9 571 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 MAP4K3Q8IVH8 894 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 ZNF710Q8N1W2 664 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CD99L2Q8TCZ2 262 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 TMEM40Q8WWA1 233 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 MINDY3Q9H8M7 445 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 LIMA1Q9UHB6 759 aaKnown RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 KIF3AQ9Y496 699 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 NME7Q9Y5B8 376 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 PTPRJQ12913 1337 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 A0A1B0GTH6 734 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 RNF225M0QZC1 329 aaPredicted RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 OATP04181 439 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CCDC192P0DO97 292 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CAPN2P17655 700 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 POU5F1Q01860 360 aaKnown RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 PTPN11Q06124 597 aaPredicted RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 COASYQ13057 564 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 MCM6Q14566 821 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 SERINC5Q86VE9 423 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 LARP4BQ92615 738 aaKnown RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 SENP6Q9GZR1 1112 aaPredicted RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 TMEM134Q9H6X4 195 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CYP26B1Q9NR63 512 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 PCDHA12Q9UN75 941 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CNTN6Q9UQ52 1028 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 DOCK4Q8N1I0 1966 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 ITIH6Q6UXX5 1313 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 XBP1P17861 261 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 YWHABP31946 246 aaKnown RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 RGS2P41220 211 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 PRCPP42785 496 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 PSMC5P62195 406 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 SP3Q02447 781 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 MYBPC2Q14324 1141 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 LRCH2Q5VUJ6 765 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 TRIM65Q6PJ69 517 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 MTHFD1LQ6UB35 978 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 LRRC8AQ8IWT6 810 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 FAM126BQ8IXS8 530 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 KIAA0319LQ8IZA0 1049 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 ATP8B4Q8TF62 1192 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 CACTINQ8WUQ7 758 aaKnown RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 TMEM106CQ9BVX2 250 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 SIK3Q9Y2K2 1263 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 PCDHA10Q9Y5I2 948 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 CCDC194A0A1B0GVG4 234 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 PLA2G4BP0C869 781 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 ATF7P17544 494 aaPredicted RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 TCF7P36402 384 aaPredicted RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 FLT3LGP49771 235 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 JAM2P57087 298 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 PSMD2Q13200 908 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 CAPSQ13938 189 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 TAF1CQ15572 869 aaPredicted RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 PRAMEF19Q5SWL8 479 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 FSIP1Q8NA03 581 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 ENOX1Q8TC92 643 aaKnown RBP5.53□□□□□ -1.52
RIF1-207ENST00000454583 ANKRD7Q92527 254 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 DDX12PQ92771 950 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 MFSD14AQ96MC6 490 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 FEZ1Q99689 392 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 TEKT3Q9BXF9 490 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 DNAJC25Q9H1X3 360 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 CDHR5Q9HBB8 845 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 GTF2IRD1Q9UHL9 959 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 MYLKQ15746 1914 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 NCANO14594 1321 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 ATP8B3O60423 1300 aa5.53□□□□□ -1.52
RIF1-207ENST00000454583 WDR64B1ANS9 1081 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 CHRNA1P02708 482 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 RPN1P04843 607 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 ITGB8P26012 769 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 QARSP47897 775 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 FOSBP53539 338 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 KCNMA1Q12791 1236 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 ARHGEF16Q5VV41 709 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 ZNF662Q6ZS27 426 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 CYFIP1Q7L576 1253 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 ZNF598Q86UK7 904 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 CPXCR1Q8N123 301 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 ERCC4Q92889 916 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 TRIM34Q9BYJ4 488 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 C17orf75Q9HAS0 396 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 IMPACTQ9P2X3 320 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 CCDC39Q9UFE4 941 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 RWDD2AQ9UIY3 292 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 COQ4Q9Y3A0 265 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 PTCH2Q9Y6C5 1203 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 PPFIA4O75335 1185 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms