RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 EIF4BP23588 611 aaKnown RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 PSMC5P62195 406 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 PUS10Q3MIT2 529 aaKnown RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 PTCRAQ6ISU1 281 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 NECAB1Q8N987 351 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 RNF169Q8NCN4 708 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 ETNPPLQ8TBG4 499 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 PABPC5Q96DU9 382 aaKnown RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 FAM20AQ96MK3 541 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 JPH2Q9BR39 696 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 FNDC1Q4ZHG4 1894 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-208ENST00000451893 HOXA2O43364 376 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 DTNBO60941 627 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 SSTR3P32745 418 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-208ENST00000451893 FOSBP53539 338 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 CDC42EP1Q00587 391 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 NPY5RQ15761 445 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 KLHL23Q8NBE8 558 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 MICAL1Q8TDZ2 1067 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 MBOAT7Q96N66 472 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 GCOM2Q9BZD3 368 aaPredicted RBP24.25■■□□□ 1.47
C9orf3-208ENST00000451893 TMEM161AQ9NX61 479 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 PLAGL2Q9UPG8 496 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 REV3LO60673 3130 aa24.25■■□□□ 1.47
C9orf3-208ENST00000451893 NCOR1O75376 2440 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 C9IYK1 514 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 PDIA4P13667 645 aaKnown RBP24.24■■□□□ 1.47
C9orf3-208ENST00000451893 GPC3P51654 580 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 NCAPH2Q6IBW4 605 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 PPP4R3AQ6IN85 833 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 THNSL1Q8IYQ7 743 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 SPRYD3Q8NCJ5 442 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 GTF3C6Q969F1 213 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 SH2D3AQ9BRG2 576 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 GJB4Q9NTQ9 266 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 MYO7AQ13402 2215 aa24.24■■□□□ 1.47
C9orf3-208ENST00000451893 QARSP47897 775 aaKnown RBP24.23■■□□□ 1.47
C9orf3-208ENST00000451893 FAM102BQ5T8I3 360 aa24.23■■□□□ 1.47
C9orf3-208ENST00000451893 OXER1Q8TDS5 423 aa24.23■■□□□ 1.47
C9orf3-208ENST00000451893 POF1BQ8WVV4 589 aa24.23■■□□□ 1.47
C9orf3-208ENST00000451893 NIFKQ9BYG3 293 aaKnown RBP24.23■■□□□ 1.47
C9orf3-208ENST00000451893 INO80BQ9C086 356 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-208ENST00000451893 ADAMTS10Q9H324 1103 aa24.23■■□□□ 1.47
C9orf3-208ENST00000451893 ELAC1Q9H777 363 aaKnown RBP24.23■■□□□ 1.47
C9orf3-208ENST00000451893 DACT1Q9NYF0 836 aa24.23■■□□□ 1.47
C9orf3-208ENST00000451893 ATG2AQ2TAZ0 1938 aa24.23■■□□□ 1.47
C9orf3-208ENST00000451893 TMEM150BA6NC51 233 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 ITGB1P05556 798 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 LINC00271P0C7V0 271 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 FGFR1P11362 822 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 DARSP14868 501 aaKnown RBP24.22■■□□□ 1.47
C9orf3-208ENST00000451893 SFPQP23246 707 aaKnown RBP eCLIP24.22■■□□□ 1.47
C9orf3-208ENST00000451893 NUCB2P80303 420 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 PPP2R5CQ13362 524 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 ME3Q16798 604 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 CSPP1Q1MSJ5 1256 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 RHPN2Q8IUC4 686 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 SLFN12Q8IYM2 578 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 LINC01465Q8N7H1 131 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 SLC7A3Q8WY07 619 aa24.22■■□□□ 1.47
C9orf3-208ENST00000451893 TBX3O15119 743 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 CTDNEP1O95476 244 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 IL9P15248 144 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 NDUFV1P49821 464 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 POLGP54098 1239 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-208ENST00000451893 PLA2G4FQ68DD2 849 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 POTEDQ86YR6 584 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 EXOC8Q8IYI6 725 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 CRIPAKQ8N1N5 446 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-208ENST00000451893 NLRP4Q96MN2 994 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 CCDC43Q96MW1 224 aaKnown RBP24.21■■□□□ 1.47
C9orf3-208ENST00000451893 C1QTNF1Q9BXJ1 281 aa24.21■■□□□ 1.47
C9orf3-208ENST00000451893 SUCLA2Q9P2R7 463 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-208ENST00000451893 SPTBN5Q9NRC6 3674 aaKnown RBP24.2■■□□□ 1.46
C9orf3-208ENST00000451893 P4HBP07237 508 aaKnown RBP24.2■■□□□ 1.46
C9orf3-208ENST00000451893 LAG3P18627 525 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 FGFR4P22455 802 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 NR5A1Q13285 461 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 TARBP2Q15633 366 aaKnown RBP24.2■■□□□ 1.46
C9orf3-208ENST00000451893 OTUD6AQ7L8S5 288 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 SPPL3Q8TCT6 385 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 CEP170P1Q96L14 293 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 TMEM117Q9H0C3 514 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 KCNMB3Q9NPA1 279 aa24.2■■□□□ 1.46
C9orf3-208ENST00000451893 TYW1Q9NV66 732 aaKnown RBP24.2■■□□□ 1.46
C9orf3-208ENST00000451893 A0A087WZ62 844 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 EML1O00423 815 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 LARGE1O95461 756 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 HYAL1Q12794 435 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 DSC3Q14574 896 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 SAFBQ15424 915 aaKnown RBP eCLIP24.19■■□□□ 1.46
C9orf3-208ENST00000451893 CLUL1Q15846 466 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 B3GNT9Q6UX72 402 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 ZNF410Q86VK4 478 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 LRRC43Q8N309 656 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 NEK9Q8TD19 979 aa24.19■■□□□ 1.46
C9orf3-208ENST00000451893 FDXACB1Q9BRP7 624 aaPredicted RBP24.19■■□□□ 1.46
C9orf3-208ENST00000451893 CYP26B1Q9NR63 512 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms