RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ASB3Q9Y575 518 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 EFCAB6Q5THR3 1501 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SUPT3HO75486 399 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 DAB1O75553 588 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 FOSP01100 380 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 FGAP02671 866 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CALM1P0DP23 149 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CALM2P0DP24 149 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CALM3P0DP25 149 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 EIF4BP23588 611 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 MRPS15P82914 257 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ECT2LQ008S8 904 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 DSG1Q02413 1049 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MCL1Q07820 350 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CETN1Q12798 172 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 TTC39AQ5SRH9 613 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 RHPN1Q8TCX5 695 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 HPS3Q969F9 1004 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 FSD1Q9BTV5 496 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.12□□□□□ -1.91
CHD9-203ENST00000447540 C1orf50Q9BV19 199 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MRPL1Q9BYD6 325 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 TEKT2Q9UIF3 430 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 NOS1P29475 1434 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MYO18AQ92614 2054 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ABCA9Q8IUA7 1624 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 A0A1B0GTH6 734 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 TRIM43BA6NCK2 446 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CD9P21926 228 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MAGEA1P43355 309 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 RNASE9P60153 205 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 PABPC1LQ4VXU2 614 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 PPP1R15BQ5SWA1 713 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ERMARDQ5T6L9 678 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZNF658Q5TYW1 1059 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 TBC1D9BQ66K14 1250 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ITIH5Q86UX2 942 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CAMK1DQ8IU85 385 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZNF420Q8TAQ5 688 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 GSDMBQ8TAX9 411 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CMTM5Q96DZ9 223 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 IRF2BPLQ9H1B7 796 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SAMSN1Q9NSI8 373 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 TLK1Q9UKI8 766 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MAFFQ9ULX9 164 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SLC22A1O15245 554 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 GYG2O15488 501 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CALUO43852 315 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 SURF6O75683 361 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 DDX58O95786 925 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ASS1P00966 412 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 HOXB6P17509 224 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 KPNA1P52294 538 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 LETM2Q2VYF4 491 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SLC45A4Q5BKX6 768 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 RNF43Q68DV7 783 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 CHAMP1Q96JM3 812 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MYD88Q99836 296 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 KLHL4Q9C0H6 718 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ARHGEF3Q9NR81 526 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SUCOQ9UBS9 1254 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 SEC63Q9UGP8 760 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 GNPTGQ9UJJ9 305 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 IFT52Q9Y366 437 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 NRXN1Q9ULB1 1477 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 UFL1O94874 794 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 OCM2P0CE71 109 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 OCMP0CE72 109 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 TRIM60Q495X7 471 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PPP1R2P3Q6NXS1 205 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 TLK2Q86UE8 772 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 EXOC3L1Q86VI1 746 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 KIAA2013Q8IYS2 634 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 LSMEM2Q8N112 164 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 UBLCP1Q8WVY7 318 aaPredicted RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 DPF3Q92784 378 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 LRMDAQ9H2I8 198 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 EHMT1Q9H9B1 1298 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PREBQ9HCU5 417 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 EXOC7Q9UPT5 735 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 LEMD3Q9Y2U8 911 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MAST1Q9Y2H9 1570 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 DNAJB5O75953 348 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 WASHC5Q12768 1159 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SLC39A14Q15043 492 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 KRT80Q6KB66 452 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 DIS3L2Q8IYB7 885 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 ZBED8Q8IZ13 594 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 SPERTQ8NA61 448 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 B3GALT6Q96L58 329 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ATP8A2Q9NTI2 1148 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 FBXO28Q9NVF7 368 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 PTBP2Q9UKA9 531 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 B3GNT3Q9Y2A9 372 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 MTO1Q9Y2Z2 717 aaKnown RBP3.12□□□□□ -1.91
CHD9-203ENST00000447540 STK24Q9Y6E0 443 aa3.12□□□□□ -1.91
CHD9-203ENST00000447540 ATP8B3O60423 1300 aa3.11□□□□□ -1.91
CHD9-203ENST00000447540 A0A087WXM4 84 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms