RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 NOP53Q9NZM5 478 aaKnown RBP14.28□□□□□ -0.12
DDX56-206ENST00000446987 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
DDX56-206ENST00000446987 DNM1LO00429 736 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 ZBTB5O15062 677 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 CDKL5O76039 1030 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 PGK2P07205 417 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.12
DDX56-206ENST00000446987 ALADP13716 330 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 HOXD10P28358 340 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 KIF5BP33176 963 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 MDM2Q00987 491 aaPredicted RBP14.27□□□□□ -0.12
DDX56-206ENST00000446987 TRIM32Q13049 653 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 MORC3Q14149 939 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 RTN1Q16799 776 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 TKFCQ3LXA3 575 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 TRIM74Q86UV6 250 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 TRIM73Q86UV7 250 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 IQCKQ8N0W5 287 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 ARMC5Q96C12 935 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 MMP19Q99542 508 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.12
DDX56-206ENST00000446987 ACAD9Q9H845 621 aa14.27□□□□□ -0.12
DDX56-206ENST00000446987 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.12
DDX56-206ENST00000446987 ADD3Q9UEY8 706 aaKnown RBP14.27□□□□□ -0.12
DDX56-206ENST00000446987 A0A0U1RQJ8 604 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 STRNO43815 780 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 SKAP2O75563 359 aaPredicted RBP14.27□□□□□ -0.13
DDX56-206ENST00000446987 RPSAP08865 295 aaKnown RBP14.27□□□□□ -0.13
DDX56-206ENST00000446987 PAEPP09466 180 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 FCER1AP12319 257 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 BMP6P22004 513 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 SMARCA1P28370 1054 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 PEX19P40855 299 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 PNOCQ13519 176 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 SETDB1Q15047 1291 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 NTRK3Q16288 839 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 ZNF792Q3KQV3 632 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 USH1GQ495M9 461 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 TNS4Q8IZW8 715 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 RAET1EQ8TD07 263 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 ATRIPQ8WXE1 791 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX56-206ENST00000446987 NCOA5Q9HCD5 579 aaKnown RBP14.27□□□□□ -0.13
DDX56-206ENST00000446987 CTDP1Q9Y5B0 961 aaPredicted RBP14.27□□□□□ -0.13
DDX56-206ENST00000446987 IVNS1ABPQ9Y6Y0 642 aa14.27□□□□□ -0.13
DDX56-206ENST00000446987 hCG_1642624A0A1W2PR95 340 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 GMNCA6NCL1 334 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 ADCY3O60266 1144 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
DDX56-206ENST00000446987 GRK4P32298 578 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 RGS2P41220 211 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX56-206ENST00000446987 KANK3Q6NY19 840 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 SLC30A10Q6XR72 485 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 GALNT15Q8N3T1 639 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 ACRBPQ8NEB7 543 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 PXYLP1Q8TE99 480 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 EZH1Q92800 747 aaPredicted RBP14.26□□□□□ -0.13
DDX56-206ENST00000446987 ABHD8Q96I13 439 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 ZNF333Q96JL9 665 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 NUP58Q9BVL2 599 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
DDX56-206ENST00000446987 FDPSP14324 419 aaKnown RBP14.25□□□□□ -0.13
DDX56-206ENST00000446987 LAMB3Q13751 1172 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CDKAL1Q5VV42 579 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 SPATA1Q5VX52 437 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 SPATA21Q7Z572 469 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CCDC82Q8N4S0 544 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 ZNF513Q8N8E2 541 aaPredicted RBP14.25□□□□□ -0.13
DDX56-206ENST00000446987 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 SLAIN1Q8ND83 568 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CCT6BQ92526 530 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 JAKMIP2Q96AA8 810 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 C8orf76Q96K31 380 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 ATP6V1G3Q96LB4 118 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 PURBQ96QR8 312 aaKnown RBP14.25□□□□□ -0.13
DDX56-206ENST00000446987 RABEP2Q9H5N1 569 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 ABHD10Q9NUJ1 306 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CYP39A1Q9NYL5 469 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 FBXO40Q9UH90 709 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 MKI67P46013 3256 aaKnown RBP14.25□□□□□ -0.13
DDX56-206ENST00000446987 PNMA6FA0A0J9YX94 578 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 ENO4A6NNW6 628 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 GYPCP04921 128 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 GNAQP50148 359 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CNTN2Q02246 1040 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 ITGB3BPQ13352 177 aaPredicted RBP14.25□□□□□ -0.13
DDX56-206ENST00000446987 ACCSLQ4AC99 568 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CMPK2Q5EBM0 449 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 MAP3K21Q5TCX8 1036 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 CACNA2D3Q8IZS8 1091 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 BICD1Q96G01 975 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 ZIM3Q96PE6 472 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 LZTS2Q9BRK4 669 aa14.25□□□□□ -0.13
DDX56-206ENST00000446987 PAPOLBQ9NRJ5 636 aaKnown RBP14.25□□□□□ -0.13
DDX56-206ENST00000446987 TRAPPC3O43617 180 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms