RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PBX3P40426 434 aa27.59■■■□□ 2.01
PMS1-214ENST00000446877 SMC1AQ14683 1233 aaKnown RBP27.59■■■□□ 2.01
PMS1-214ENST00000446877 BMS1Q14692 1282 aaKnown RBP27.59■■■□□ 2.01
PMS1-214ENST00000446877 ECHDC2Q86YB7 292 aa27.59■■■□□ 2.01
PMS1-214ENST00000446877 CCDC12Q8WUD4 166 aaPredicted RBP27.59■■■□□ 2.01
PMS1-214ENST00000446877 CRYGNQ8WXF5 182 aa27.59■■■□□ 2.01
PMS1-214ENST00000446877 ATOH1Q92858 354 aaPredicted RBP27.59■■■□□ 2.01
PMS1-214ENST00000446877 NRBP2Q9NSY0 501 aa27.59■■■□□ 2.01
PMS1-214ENST00000446877 PLXNA4Q9HCM2 1894 aa27.59■■■□□ 2.01
PMS1-214ENST00000446877 USP34Q70CQ2 3546 aa27.59■■■□□ 2.01
PMS1-214ENST00000446877 FGD1P98174 961 aa27.58■■■□□ 2.01
PMS1-214ENST00000446877 PFKFB3Q16875 520 aaPredicted RBP27.58■■■□□ 2.01
PMS1-214ENST00000446877 PRR16Q569H4 304 aa27.58■■■□□ 2.01
PMS1-214ENST00000446877 REXO1Q8N1G1 1221 aaKnown RBP27.58■■■□□ 2.01
PMS1-214ENST00000446877 MRPL43Q8N983 215 aaKnown RBP27.58■■■□□ 2.01
PMS1-214ENST00000446877 SCLT1Q96NL6 688 aa27.58■■■□□ 2.01
PMS1-214ENST00000446877 NECTIN4Q96NY8 510 aa27.58■■■□□ 2.01
PMS1-214ENST00000446877 ADAMTS10Q9H324 1103 aa27.58■■■□□ 2.01
PMS1-214ENST00000446877 RNF19AQ9NV58 838 aa27.58■■■□□ 2.01
PMS1-214ENST00000446877 LOXHD1Q8IVV2 1947 aa27.57■■■□□ 2
PMS1-214ENST00000446877 CCDC196A0A1B0GTZ2 297 aa27.57■■■□□ 2
PMS1-214ENST00000446877 CDC27P30260 824 aa27.57■■■□□ 2
PMS1-214ENST00000446877 LRRC71Q8N4P6 559 aa27.57■■■□□ 2
PMS1-214ENST00000446877 KREMEN2Q8NCW0 462 aa27.57■■■□□ 2
PMS1-214ENST00000446877 RIPOR3Q96MK2 946 aa27.57■■■□□ 2
PMS1-214ENST00000446877 FAM217BQ9NTX9 383 aaPredicted RBP27.57■■■□□ 2
PMS1-214ENST00000446877 FAM86C1Q9NVL1 165 aa27.57■■■□□ 2
PMS1-214ENST00000446877 ZFHX2Q9C0A1 2572 aaPredicted RBP27.56■■■□□ 2
PMS1-214ENST00000446877 GFRA3O60609 400 aa27.56■■■□□ 2
PMS1-214ENST00000446877 CA8P35219 290 aa27.56■■■□□ 2
PMS1-214ENST00000446877 NUBP1P53384 320 aa27.56■■■□□ 2
PMS1-214ENST00000446877 RCAN1P53805 252 aa27.56■■■□□ 2
PMS1-214ENST00000446877 ITIH3Q06033 890 aa27.56■■■□□ 2
PMS1-214ENST00000446877 UBALD2Q8IYN6 164 aa27.56■■■□□ 2
PMS1-214ENST00000446877 TMEM87AQ8NBN3 555 aa27.56■■■□□ 2
PMS1-214ENST00000446877 ZMYND12Q9H0C1 365 aa27.56■■■□□ 2
PMS1-214ENST00000446877 ADAM7Q9H2U9 754 aa27.56■■■□□ 2
PMS1-214ENST00000446877 HCFC2Q9Y5Z7 792 aa27.56■■■□□ 2
PMS1-214ENST00000446877 FNDC1Q4ZHG4 1894 aaPredicted RBP27.55■■■□□ 2
PMS1-214ENST00000446877 ESYT2A0FGR8 921 aa27.55■■■□□ 2
PMS1-214ENST00000446877 WDR64B1ANS9 1081 aa27.55■■■□□ 2
PMS1-214ENST00000446877 EOMESO95936 686 aa27.55■■■□□ 2
PMS1-214ENST00000446877 GNA11P29992 359 aa27.55■■■□□ 2
PMS1-214ENST00000446877 ADD1P35611 737 aaKnown RBP27.55■■■□□ 2
PMS1-214ENST00000446877 ALDH7A1P49419 539 aaKnown RBP27.55■■■□□ 2
PMS1-214ENST00000446877 IRX6P78412 446 aaPredicted RBP27.55■■■□□ 2
PMS1-214ENST00000446877 MTMR3Q13615 1198 aa27.55■■■□□ 2
PMS1-214ENST00000446877 KRT32Q14532 448 aa27.55■■■□□ 2
PMS1-214ENST00000446877 SLC39A11Q8N1S5 342 aa27.55■■■□□ 2
PMS1-214ENST00000446877 A0A0U1RQF3 1178 aa27.54■■■□□ 2
PMS1-214ENST00000446877 C2orf71A6NGG8 1288 aa27.54■■■□□ 2
PMS1-214ENST00000446877 CACNA1HO95180 2353 aa27.54■■■□□ 2
PMS1-214ENST00000446877 METAP2P50579 478 aaKnown RBP eCLIP27.54■■■□□ 2
PMS1-214ENST00000446877 CLLU1OSQ5K130 101 aa27.54■■■□□ 2
PMS1-214ENST00000446877 ZNF668Q96K58 619 aaPredicted RBP27.54■■■□□ 2
PMS1-214ENST00000446877 MRPL9Q9BYD2 267 aaKnown RBP27.54■■■□□ 2
PMS1-214ENST00000446877 DISC1Q9NRI5 854 aa27.54■■■□□ 2
PMS1-214ENST00000446877 DACT1Q9NYF0 836 aa27.54■■■□□ 2
PMS1-214ENST00000446877 SORCS3Q9UPU3 1222 aa27.54■■■□□ 2
PMS1-214ENST00000446877 CXCL14O95715 111 aa27.53■■■□□ 2
PMS1-214ENST00000446877 OATP04181 439 aa27.53■■■□□ 2
PMS1-214ENST00000446877 HMGB1P09429 215 aaKnown RBP27.53■■■□□ 2
PMS1-214ENST00000446877 DARSP14868 501 aaKnown RBP27.53■■■□□ 2
PMS1-214ENST00000446877 MTHFRP42898 656 aa27.53■■■□□ 2
PMS1-214ENST00000446877 GPC3P51654 580 aa27.53■■■□□ 2
PMS1-214ENST00000446877 TSGA10IPQ3SY00 556 aa27.53■■■□□ 2
PMS1-214ENST00000446877 LINC01465Q8N7H1 131 aa27.53■■■□□ 2
PMS1-214ENST00000446877 HELQQ8TDG4 1101 aa27.53■■■□□ 2
PMS1-214ENST00000446877 NLRP7Q8WX94 980 aa27.53■■■□□ 2
PMS1-214ENST00000446877 CLASP2O75122 1294 aaKnown RBP27.52■■■□□ 2
PMS1-214ENST00000446877 PDGFBP01127 241 aaPredicted RBP27.52■■■□□ 2
PMS1-214ENST00000446877 CIITAP33076 1130 aa27.52■■■□□ 2
PMS1-214ENST00000446877 BICD2Q8TD16 824 aa27.52■■■□□ 2
PMS1-214ENST00000446877 TMEM169Q96HH4 297 aa27.52■■■□□ 2
PMS1-214ENST00000446877 POMKQ9H5K3 350 aa27.52■■■□□ 2
PMS1-214ENST00000446877 H0Y858 1186 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 BCAR1P56945 870 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 AKAP17AQ02040 695 aaKnown RBP27.51■■□□□ 1.99
PMS1-214ENST00000446877 TBC1D8BQ0IIM8 1120 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 ADCK5Q3MIX3 580 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 RASEFQ8IZ41 740 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 SNX27Q96L92 541 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 CDH22Q9UJ99 828 aa27.51■■□□□ 1.99
PMS1-214ENST00000446877 C2CD4DB7Z1M9 353 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 ZNF862O60290 1169 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 FGFR4P22455 802 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 CDC42EP1Q00587 391 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 PRKCEQ02156 737 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 ATAT1Q5SQI0 421 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 ZNF598Q86UK7 904 aaKnown RBP27.5■■□□□ 1.99
PMS1-214ENST00000446877 EVPLQ92817 2033 aa27.5■■□□□ 1.99
PMS1-214ENST00000446877 NT5C1B-RDH14C9J2C7 533 aa27.49■■□□□ 1.99
PMS1-214ENST00000446877 ADAMTS3O15072 1205 aa27.49■■□□□ 1.99
PMS1-214ENST00000446877 GALR2O43603 387 aaPredicted RBP27.49■■□□□ 1.99
PMS1-214ENST00000446877 RSPH1Q8WYR4 309 aa27.49■■□□□ 1.99
PMS1-214ENST00000446877 GCOM2Q9BZD3 368 aaPredicted RBP27.49■■□□□ 1.99
PMS1-214ENST00000446877 CHST12Q9NRB3 414 aa27.49■■□□□ 1.99
PMS1-214ENST00000446877 DZANK1Q9NVP4 752 aa27.49■■□□□ 1.99
PMS1-214ENST00000446877 CFAP54Q96N23 3096 aa27.49■■□□□ 1.99
PMS1-214ENST00000446877 CARNS1A5YM72 827 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms