RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ZBTB10Q96DT7 871 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 MTIF3Q9H2K0 278 aaKnown RBP19.16■□□□□ 0.66
LIME1-202ENST00000444951 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 SLC4A7Q9Y6M7 1214 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 ZNF202O95125 648 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 FAM160A1Q05DH4 1040 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 NAALADL2Q58DX5 795 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 CEP57L1Q8IYX8 460 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 RPUSD2Q8IZ73 545 aaKnown RBP19.15■□□□□ 0.66
LIME1-202ENST00000444951 LARP4BQ92615 738 aaKnown RBP19.15■□□□□ 0.66
LIME1-202ENST00000444951 GAS2L1Q99501 681 aaPredicted RBP19.15■□□□□ 0.66
LIME1-202ENST00000444951 NIFKQ9BYG3 293 aaKnown RBP19.15■□□□□ 0.66
LIME1-202ENST00000444951 CYP26B1Q9NR63 512 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 BLOC1S4Q9NUP1 217 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
LIME1-202ENST00000444951 DBR1Q9UK59 544 aaKnown RBP19.15■□□□□ 0.66
LIME1-202ENST00000444951 PTPRSQ13332 1948 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 FAM237AA0A1B0GTK4 181 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 C17orf102A2RUQ5 167 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 USO1O60763 962 aaKnown RBP19.14■□□□□ 0.65
LIME1-202ENST00000444951 NR1I2O75469 434 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 RARRES1P49788 294 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 ZNF200P98182 395 aaPredicted RBP19.14■□□□□ 0.65
LIME1-202ENST00000444951 RAD51AP2Q09MP3 1159 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 E2F4Q16254 413 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 LONRF3Q496Y0 759 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 ZNF484Q5JVG2 852 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 MAEAQ7L5Y9 396 aa19.14■□□□□ 0.65
LIME1-202ENST00000444951 FMR1NBQ8N0W7 255 aaPredicted RBP19.14■□□□□ 0.65
LIME1-202ENST00000444951 PYM1Q9BRP8 204 aaKnown RBP19.14■□□□□ 0.65
LIME1-202ENST00000444951 TRANK1O15050 2925 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 ZBTB42B2RXF5 422 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 IQCF3P0C7M6 154 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
LIME1-202ENST00000444951 ATP2A2P16615 1042 aaKnown RBP19.13■□□□□ 0.65
LIME1-202ENST00000444951 AFMP43652 599 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 POLGP54098 1239 aaPredicted RBP19.13■□□□□ 0.65
LIME1-202ENST00000444951 TBC1D8BQ0IIM8 1120 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 HIC1Q14526 733 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 GDF6Q6KF10 455 aaPredicted RBP19.13■□□□□ 0.65
LIME1-202ENST00000444951 PADI6Q6TGC4 694 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 SV2BQ7L1I2 683 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 GPBP1Q86WP2 473 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 GRAMD1CQ8IYS0 662 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 CNNM3Q8NE01 707 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 LMBR1Q8WVP7 490 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 DHX38Q92620 1227 aaKnown RBP19.13■□□□□ 0.65
LIME1-202ENST00000444951 XIRP2A4UGR9 3374 aa19.13■□□□□ 0.65
LIME1-202ENST00000444951 NRCAMQ92823 1304 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 NPHP3-ACAD11A0A0J9YXS1 232 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 RRN3P2A6NIE6 340 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 PITPNM1O00562 1244 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 ACTN4O43707 911 aaKnown RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 KINO60870 393 aaKnown RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 ARHGEF15O94989 841 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 KRT18P05783 430 aaKnown RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 KLRC1P26715 233 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 PTPN11Q06124 597 aaPredicted RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 SNW1Q13573 536 aaKnown RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 GPNMBQ14956 572 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 CCDC85BQ15834 202 aaPredicted RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 METTL13Q8N6R0 699 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 SYT2Q8N9I0 419 aaPredicted RBP19.12■□□□□ 0.65
LIME1-202ENST00000444951 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 RUSC1Q9BVN2 902 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 SUGCTQ9HAC7 445 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 SLC28A3Q9HAS3 691 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 POLD4Q9HCU8 107 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 DACT1Q9NYF0 836 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 GTF2IRD1Q9UHL9 959 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 PCDHA11Q9Y5I1 949 aa19.12■□□□□ 0.65
LIME1-202ENST00000444951 ARID2Q68CP9 1835 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 COL1A2P08123 1366 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 TREHO43280 583 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 PFKMP08237 780 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 SLFN14P0C7P3 912 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 GNAT1P11488 350 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 IGFBP4P22692 258 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 TARBP2Q15633 366 aaKnown RBP19.11■□□□□ 0.65
LIME1-202ENST00000444951 PTGISQ16647 500 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 PPP2R2DQ66LE6 453 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 KRBA2Q6ZNG9 492 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 LRRC71Q8N4P6 559 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 KCTD17Q8N5Z5 321 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 GPT2Q8TD30 523 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 CUEDC2Q9H467 287 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 TUBE1Q9UJT0 475 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 NOD1Q9Y239 953 aa19.11■□□□□ 0.65
LIME1-202ENST00000444951 C22orf31O95567 290 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 CASP1P29466 404 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
LIME1-202ENST00000444951 EMC2Q15006 297 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 TCTN1Q2MV58 587 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 MARCH8Q5T0T0 291 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 RINT1Q6NUQ1 792 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 MTHFD1LQ6UB35 978 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 DYMQ7RTS9 669 aa19.1■□□□□ 0.65
LIME1-202ENST00000444951 SESTD1Q86VW0 696 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms