RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ERMARDQ5T6L9 678 aa20.56■□□□□ 0.88
PMPCB-204ENST00000444457 STRIP1Q5VSL9 837 aa20.56■□□□□ 0.88
PMPCB-204ENST00000444457 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
PMPCB-204ENST00000444457 GPIHBP1Q8IV16 184 aa20.56■□□□□ 0.88
PMPCB-204ENST00000444457 MAGOHBQ96A72 148 aaKnown RBP20.56■□□□□ 0.88
PMPCB-204ENST00000444457 SPATS2LQ9NUQ6 558 aaKnown RBP20.56■□□□□ 0.88
PMPCB-204ENST00000444457 TRPC6Q9Y210 931 aa20.56■□□□□ 0.88
PMPCB-204ENST00000444457 DCDC2CA8MYV0 355 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 MMP10P09238 476 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 FKBP1AP62942 108 aaKnown RBP20.55■□□□□ 0.88
PMPCB-204ENST00000444457 TMEM179Q6ZVK1 233 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 CCDC63Q8NA47 563 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 ETNPPLQ8TBG4 499 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 THOC1Q96FV9 657 aaKnown RBP20.55■□□□□ 0.88
PMPCB-204ENST00000444457 P2RX7Q99572 595 aaKnown RBP20.55■□□□□ 0.88
PMPCB-204ENST00000444457 NEUROG2Q9H2A3 272 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 CEP72Q9P209 647 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 FBXL5Q9UKA1 691 aa20.55■□□□□ 0.88
PMPCB-204ENST00000444457 ANP32DO95626 131 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 GNA14O95837 355 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 SLC12A3P55017 1021 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 MARSP56192 900 aaKnown RBP20.54■□□□□ 0.88
PMPCB-204ENST00000444457 MAP2K1Q02750 393 aaPredicted RBP20.54■□□□□ 0.88
PMPCB-204ENST00000444457 SPIRE1Q08AE8 756 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 DACT2Q5SW24 774 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 L3MBTL3Q96JM7 780 aaPredicted RBP20.54■□□□□ 0.88
PMPCB-204ENST00000444457 XPO6Q96QU8 1125 aaKnown RBP20.54■□□□□ 0.88
PMPCB-204ENST00000444457 SPAG5Q96R06 1193 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 AMNQ9BXJ7 453 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 FAM129AQ9BZQ8 928 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 KCTD10Q9H3F6 313 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 POTEFA5A3E0 1075 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 CFAP73A6NFT4 308 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 POTEEQ6S8J3 1075 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 TRIM59Q8IWR1 403 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 AKT1S1Q96B36 256 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 PSMD1Q99460 953 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 PITPNM2Q9BZ72 1349 aa20.54■□□□□ 0.88
PMPCB-204ENST00000444457 F5H6K3 240 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 NOL4O94818 638 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 GDF11O95390 407 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 SNAP25P60880 206 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 KLRC3Q07444 240 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ITIH4Q14624 930 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 PRR16Q569H4 304 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ARSHQ5FYA8 562 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ANKS4BQ8N8V4 417 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 SCFD2Q8WU76 684 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 UBLCP1Q8WVY7 318 aaPredicted RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 SH3GL3Q99963 347 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 NLRC4Q9NPP4 1024 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 LUC7LQ9NQ29 371 aaKnown RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 PACSIN2Q9UNF0 486 aaPredicted RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ECE2O60344 883 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 KRT18P05783 430 aaKnown RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ALADP13716 330 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 KLRC1P26715 233 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 RNASE9P60153 205 aaKnown RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 NBPF20Q3BBV1 942 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ZC3H3Q8IXZ2 948 aaKnown RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 GMCL1P1Q8NEA9 526 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 TCP11Q8WWU5 503 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 TLCD1Q96CP7 247 aa20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ZNF317Q96PQ6 595 aaPredicted RBP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.53■□□□□ 0.88
PMPCB-204ENST00000444457 ANKRD33BA6NCL7 494 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 TBX3O15119 743 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 ASAP2O43150 1006 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 ZNF268Q14587 947 aaPredicted RBP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 Q4G0T1 1027 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 TDRD12Q587J7 1177 aaKnown RBP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 FAM83BQ5T0W9 1011 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 CATSPER3Q86XQ3 398 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 GMCL1Q96IK5 515 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 LSM14BQ9BX40 385 aaKnown RBP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 NUCKS1Q9H1E3 243 aaKnown RBP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 KIF9Q9HAQ2 790 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 HOMER3Q9NSC5 361 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 SMNDC1O75940 238 aaKnown RBP eCLIP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 NDUFB10O96000 172 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 ABCB5Q2M3G0 1257 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 USH1GQ495M9 461 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 FBXO11Q86XK2 927 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 DDX42Q86XP3 938 aaKnown RBP eCLIP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 SYN2Q92777 582 aaPredicted RBP20.52■□□□□ 0.88
PMPCB-204ENST00000444457 LENG9Q96B70 501 aa20.52■□□□□ 0.88
PMPCB-204ENST00000444457 SLX4Q8IY92 1834 aa20.52■□□□□ 0.87
PMPCB-204ENST00000444457 EME2A4GXA9 379 aaPredicted RBP20.51■□□□□ 0.87
PMPCB-204ENST00000444457 ADCY2Q08462 1091 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SLC9C1Q4G0N8 1177 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SYDE2Q5VT97 1194 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 PPP4R3CPQ6ZMV5 832 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 TMC3Q7Z5M5 1100 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 PIGWQ7Z7B1 504 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 ERMNQ8TAM6 284 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms