RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PARP9Q8IXQ6 854 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 EPS8L3Q8TE67 593 aaKnown RBP12.58□□□□□ -0.4
HCFC1-203ENST00000444191 DNAJC19Q96DA6 116 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 MTMR9Q96QG7 549 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-203ENST00000444191 SHBGP04278 402 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 LMNB1P20700 586 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 IFI35P80217 286 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-203ENST00000444191 ZNF365Q70YC5 407 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 DPH6Q7L8W6 267 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 SPATS2Q86XZ4 545 aaKnown RBP12.58□□□□□ -0.4
HCFC1-203ENST00000444191 TBC1D22AQ8WUA7 517 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 CHMP6Q96FZ7 201 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
HCFC1-203ENST00000444191 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 MYH15Q9Y2K3 1946 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
HCFC1-203ENST00000444191 WDR91A4D1P6 747 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 CCDC188H7C350 402 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 GH2P01242 217 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 KRT15P19012 456 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 ATP2B4P23634 1241 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 GDF3Q9NR23 364 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 TAS2R14Q9NYV8 317 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 NEDD9Q14511 834 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 CCDC137Q6PK04 289 aaKnown RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 RPUSD2Q8IZ73 545 aaKnown RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 CNPY4Q8N129 248 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 SH3GL2Q99962 352 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 EIF2AK1Q9BQI3 630 aaKnown RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 SEMA4AQ9H3S1 761 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 TISP43B9A030 160 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 F5H6K3 240 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 CALCAP01258 141 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 KLRC3Q07444 240 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 SEPT14Q6ZU15 432 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 SRRM1Q8IYB3 904 aaKnown RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
HCFC1-203ENST00000444191 FAM167BQ9BTA0 163 aa12.57□□□□□ -0.4
HCFC1-203ENST00000444191 H0Y3Z8 333 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 MMP14P50281 582 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 SGO2Q562F6 1265 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 INTS8Q75QN2 995 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 RPAINQ86UA6 219 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 LRRC34Q8IZ02 419 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 SLC20A1Q8WUM9 679 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 HAUS1Q96CS2 278 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 FAM84AQ96KN4 292 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 DDX4Q9NQI0 724 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 PCDHAC2Q9Y5I4 1007 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 FGRP09769 529 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 SCP2P22307 547 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ITGB3BPQ13352 177 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 FAM102BQ5T8I3 360 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 CYB5D1Q6P9G0 228 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ZNF449Q6P9G9 518 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 TAOK1Q7L7X3 1001 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ARHGEF26Q96DR7 871 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 SAAL1Q96ER3 474 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 XPO6Q96QU8 1125 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 TYW1Q9NV66 732 aaKnown RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 L3MBTL1Q9Y468 752 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ALG6Q9Y672 507 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 A0A1B0GUA9 196 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 TOM1O60784 492 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 SOX5P35711 763 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 LMBRD2Q68DH5 695 aaPredicted RBP12.56□□□□□ -0.4
HCFC1-203ENST00000444191 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 JAMLQ86YT9 394 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 PASD1Q8IV76 773 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 ZFPM1Q8IX07 1006 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 FGFR1OP2Q9NVK5 253 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 KCNG1Q9UIX4 513 aa12.56□□□□□ -0.4
HCFC1-203ENST00000444191 TCP11X1B4DZS4 312 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 GIT2Q14161 759 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 RFFLQ8WZ73 363 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 INTS2Q9H0H0 1204 aaKnown RBP12.55□□□□□ -0.4
HCFC1-203ENST00000444191 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 HOMER3Q9NSC5 361 aa12.55□□□□□ -0.4
HCFC1-203ENST00000444191 KLHL11Q9NVR0 708 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms