RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ADAM2Q99965 735 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 C11orf84Q9BUA3 381 aaPredicted RBP9.83□□□□□ -0.84
USP6NL-203ENST00000443016 PCDHB7Q9Y5E2 793 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 MYH9P35579 1960 aaKnown RBP9.83□□□□□ -0.84
USP6NL-203ENST00000443016 CSPG5O95196 566 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 GCFC2P16383 781 aaKnown RBP9.83□□□□□ -0.84
USP6NL-203ENST00000443016 UGCGQ16739 394 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 MTERF2Q49AM1 385 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 GTF3C6Q969F1 213 aa9.83□□□□□ -0.84
USP6NL-203ENST00000443016 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
USP6NL-203ENST00000443016 RYDENQ9NUL5 291 aaKnown RBP9.83□□□□□ -0.84
USP6NL-203ENST00000443016 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
USP6NL-203ENST00000443016 TTC3P53804 2025 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 TNFRSF10AO00220 468 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 SLC37A4O43826 429 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 CTDNEP1O95476 244 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 RB1P06400 928 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 KRT2P35908 639 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 BMPR1AP36894 532 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 DNM2P50570 870 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 TIGD5Q53EQ6 642 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 XKR3Q5GH77 459 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 SPOUT1Q5T280 376 aaKnown RBP9.82□□□□□ -0.84
USP6NL-203ENST00000443016 PPP4R3AQ6IN85 833 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 BANK1Q8NDB2 785 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 ZNF668Q96K58 619 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-203ENST00000443016 SH2D3AQ9BRG2 576 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 TMX1Q9H3N1 280 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 EVPLQ92817 2033 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 ZSCAN20P17040 1043 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-203ENST00000443016 KCNA5P22460 613 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 FOSBP53539 338 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 SLC24A5Q71RS6 500 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 ZNF689Q96CS4 500 aaPredicted RBP9.82□□□□□ -0.84
USP6NL-203ENST00000443016 FAM20AQ96MK3 541 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 ERVK-5Q9HDB9 667 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 C1orf112Q9NSG2 853 aa9.82□□□□□ -0.84
USP6NL-203ENST00000443016 GPR32O75388 356 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 LARGE1O95461 756 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 BMP1P13497 986 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 EIF4BP23588 611 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 SARSP49591 514 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 PSMC5P62195 406 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 NR5A1Q13285 461 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 FAM43BQ6ZT52 329 aaPredicted RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 FAM228AQ86W67 206 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 CMTR2Q8IYT2 770 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 CLP1Q92989 425 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 MBOAT7Q96N66 472 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 RC3H2Q9HBD1 1191 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 KIF3AQ9Y496 699 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 C5orf42Q9H799 3197 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 SIP14410 1827 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 TMEM150BA6NC51 233 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 DKC1O60832 514 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 KCNA1Q09470 495 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 CCDC83Q8IWF9 413 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 INTS4Q96HW7 963 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 NSUN3Q9H649 340 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 UBE2ZQ9H832 354 aaPredicted RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 ATP6V0A4Q9HBG4 840 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 ALG13Q9NP73 1137 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 RGS18Q9NS28 235 aa9.81□□□□□ -0.84
USP6NL-203ENST00000443016 MRPL42Q9Y6G3 142 aaKnown RBP9.81□□□□□ -0.84
USP6NL-203ENST00000443016 C5orf67F2Z3F1 127 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 MGEA5O60502 916 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 JAK2O60674 1132 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 PPP1R37O75864 691 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 QARSP47897 775 aaKnown RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 CDC42EP1Q00587 391 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 CUL4AQ13619 759 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 SLFN12Q8IYM2 578 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 RNF169Q8NCN4 708 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 NSUN7Q8NE18 718 aaKnown RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 SLC7A3Q8WY07 619 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 NECAB3Q96P71 396 aaPredicted RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 JPH2Q9BR39 696 aaPredicted RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 LLPHQ9BRT6 129 aaKnown RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 PLVAPQ9BX97 442 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 KCNMB3Q9NPA1 279 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 COL4A4P53420 1690 aaPredicted RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 TBKBP1A7MCY6 615 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 EML1O00423 815 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 TBX3O15119 743 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 GRM6O15303 877 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 P4HBP07237 508 aaKnown RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 GATMP50440 423 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 GPC3P51654 580 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 PPP2R5CQ13362 524 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 SAFBQ15424 915 aaKnown RBP eCLIP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 TCEAL5Q5H9L2 206 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms