RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TMC5Q6UXY8 1006 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 CABP7Q86V35 215 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 MCF2L2Q86YR7 1114 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 SIRT2Q8IXJ6 389 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 IFNL3Q8IZI9 196 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 MAML2Q8IZL2 1156 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-210ENST00000441703 KBTBD3Q8NAB2 608 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 GPR152Q8TDT2 470 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 SYTL5Q8TDW5 730 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-210ENST00000441703 LMBR1Q8WVP7 490 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 GLG1Q92896 1179 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 KIF12Q96FN5 646 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 SHDQ96IW2 340 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 FOXQ1Q9C009 403 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 IL17RBQ9NRM6 502 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 KCND1Q9NSA2 647 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 NRCAMQ92823 1304 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 EIF4E1BA6NMX2 242 aaKnown RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 M0R2C6 588 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 KIF2AO00139 706 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 RNF113AO15541 343 aaKnown RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 ATP8B1O43520 1251 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 FOXD2O60548 495 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 NMT2O60551 498 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 LRP3O75074 770 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 GADD45BO75293 160 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 TUBB4AP04350 444 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 NR3C2P08235 984 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 TNNT1P13805 278 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 SARSP49591 514 aaKnown RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 PTPN14Q15678 1187 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 LPAL2Q16609 132 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 LAIR1Q6GTX8 287 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 KANK3Q6NY19 840 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 PRR23BQ6ZRT6 265 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 ZBTB44Q8NCP5 570 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 STAMQ92783 540 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 ZNF558Q96NG5 402 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 NAPBQ9H115 298 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 SFXN1Q9H9B4 322 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 TYW1Q9NV66 732 aaKnown RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-210ENST00000441703 ANKFY1Q9P2R3 1169 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 MIA3Q5JRA6 1907 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 LOXHD1Q8IVV2 1947 aa7.29□□□□□ -1.24
HDAC6-210ENST00000441703 ABCB11O95342 1321 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 CACNA1IQ9P0X4 2223 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 DENND4AQ7Z401 1863 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 DOCK5Q9H7D0 1870 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 FLNBO75369 2602 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 DENND3A2RUS2 1198 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 C2orf71A6NGG8 1288 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 SRRM3A6NNA2 597 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 TAF4O00268 1085 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 LILRB5O75023 590 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 LRRN2O75325 713 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 RPLP2P05387 115 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 RETP07949 1114 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 PDHBP11177 359 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 TOP1P11387 765 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 GLULP15104 373 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 UBA1P22314 1058 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 CDC25BP30305 580 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 MAGEA9P43362 315 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 HNRNPH2P55795 449 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 MRPS6P82932 125 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 ZNF543Q08ER8 600 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 UBXN2BQ14CS0 331 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 AASDHQ4L235 1098 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 TEX35Q5T0J7 233 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 IER5Q5VY09 327 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 GPR149Q86SP6 731 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 RTN4RL1Q86UN2 441 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 TXLNBQ8N3L3 684 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 MRPL43Q8N983 215 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 DNAJB3Q8WWF6 145 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 RSAD2Q8WXG1 361 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 NXPE3Q969Y0 559 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 OSBPL3Q9H4L5 887 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 AGO3Q9H9G7 860 aaKnown RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 PXMP2Q9NR77 195 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 SEMA4GQ9NTN9 838 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 SPG21Q9NZD8 308 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 COL20A1Q9P218 1284 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 HCSTQ9UBK5 93 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 PADI3Q9ULW8 664 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 ATP6V1DQ9Y5K8 247 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 TRPV2Q9Y5S1 764 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 SQORQ9Y6N5 450 aa7.28□□□□□ -1.24
HDAC6-210ENST00000441703 FNDC1Q4ZHG4 1894 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-210ENST00000441703 FRYLO94915 3013 aa7.27□□□□□ -1.25
HDAC6-210ENST00000441703 TRIM6-TRIM34B2RNG4 842 aa7.27□□□□□ -1.25
HDAC6-210ENST00000441703 AP5Z1O43299 807 aa7.27□□□□□ -1.25
HDAC6-210ENST00000441703 ORC4O43929 436 aa7.27□□□□□ -1.25
HDAC6-210ENST00000441703 RANBP6O60518 1105 aaKnown RBP7.27□□□□□ -1.25
HDAC6-210ENST00000441703 CXCL14O95715 111 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms