RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZNF710Q8N1W2 664 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 FIBCD1Q8N539 461 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 FBXO22Q8NEZ5 403 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 SLC7A3Q8WY07 619 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 HSD17B14Q9BPX1 270 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 JPH2Q9BR39 696 aaPredicted RBP15.36■□□□□ 0.05
LTBR-202ENST00000440421 FDXACB1Q9BRP7 624 aaPredicted RBP15.36■□□□□ 0.05
LTBR-202ENST00000440421 PRDM6Q9NQX0 595 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 MTCH2Q9Y6C9 303 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 TTC3P53804 2025 aa15.36■□□□□ 0.05
LTBR-202ENST00000440421 A0A087WWV3 80 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 H3BQV1 296 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 DARSP14868 501 aaKnown RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 RFC5P40937 340 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 TRAPPC10P48553 1259 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 SARSP49591 514 aaKnown RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 GATMP50440 423 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 TOB1P50616 345 aaPredicted RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 ORC2Q13416 577 aaPredicted RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 BTG3Q14201 252 aaPredicted RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 PAN2Q504Q3 1202 aaKnown RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 TMEM192Q8IY95 271 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 CRIPAKQ8N1N5 446 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 NEK9Q8TD19 979 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 ZNF689Q96CS4 500 aaPredicted RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 NLRP4Q96MN2 994 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 GCOM2Q9BZD3 368 aaPredicted RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 RGS18Q9NS28 235 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 C1orf112Q9NSG2 853 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.35■□□□□ 0.05
LTBR-202ENST00000440421 PCDHB7Q9Y5E2 793 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 PCDHB6Q9Y5E3 794 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 ARID2Q68CP9 1835 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 COL4A6Q14031 1691 aa15.35■□□□□ 0.05
LTBR-202ENST00000440421 CDC42EP1Q00587 391 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 DSC3Q14574 896 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 EMC2Q15006 297 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 SLC24A5Q71RS6 500 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 EXOC8Q8IYI6 725 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 PRPF31Q8WWY3 499 aaKnown RBP15.34■□□□□ 0.05
LTBR-202ENST00000440421 CCDC43Q96MW1 224 aaKnown RBP15.34■□□□□ 0.05
LTBR-202ENST00000440421 SAMD11Q96NU1 681 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 DHX33Q9H6R0 707 aaKnown RBP15.34■□□□□ 0.05
LTBR-202ENST00000440421 RC3H2Q9HBD1 1191 aaKnown RBP15.34■□□□□ 0.05
LTBR-202ENST00000440421 PPME1Q9Y570 386 aa15.34■□□□□ 0.05
LTBR-202ENST00000440421 NLRC5Q86WI3 1866 aa15.33■□□□□ 0.05
LTBR-202ENST00000440421 C9IYK1 514 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 MED24O75448 989 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 LYPLA2O95372 231 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 SRGAP2CP0DJJ0 459 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 SPATA31C1P0DKV0 1188 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
LTBR-202ENST00000440421 POU3F3P20264 500 aaPredicted RBP15.33■□□□□ 0.04
LTBR-202ENST00000440421 CTNNB1P35222 781 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 PTGDRQ13258 359 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 SKIV2LQ15477 1246 aaKnown RBP15.33■□□□□ 0.04
LTBR-202ENST00000440421 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.04
LTBR-202ENST00000440421 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 CATSPER3Q86XQ3 398 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 C4orf32Q8N8J7 132 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.04
LTBR-202ENST00000440421 MTRQ99707 1265 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 ANKEF1Q9NU02 776 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 COL4A3BPQ9Y5P4 624 aa15.33■□□□□ 0.04
LTBR-202ENST00000440421 GPM6BQ13491 265 aa15.32■□□□□ 0.04
LTBR-202ENST00000440421 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
LTBR-202ENST00000440421 FAM43BQ6ZT52 329 aaPredicted RBP15.32■□□□□ 0.04
LTBR-202ENST00000440421 CMTR2Q8IYT2 770 aaKnown RBP15.32■□□□□ 0.04
LTBR-202ENST00000440421 TCP11Q8WWU5 503 aa15.32■□□□□ 0.04
LTBR-202ENST00000440421 TUFT1Q9NNX1 390 aa15.32■□□□□ 0.04
LTBR-202ENST00000440421 XPNPEP1Q9NQW7 623 aa15.32■□□□□ 0.04
LTBR-202ENST00000440421 MRPL42Q9Y6G3 142 aaKnown RBP15.32■□□□□ 0.04
LTBR-202ENST00000440421 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 EYSQ5T1H1 3165 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 PRRC2BQ5JSZ5 2229 aaKnown RBP15.31■□□□□ 0.04
LTBR-202ENST00000440421 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 H3BNC9 293 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 LINC00271P0C7V0 271 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 FGFR1P11362 822 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
LTBR-202ENST00000440421 BMPR1AP36894 532 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 RARRES1P49788 294 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 LAMTOR4Q0VGL1 99 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 CUL4AQ13619 759 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 POTEGQ6S5H5 508 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 POLR3CQ9BUI4 534 aaPredicted RBP15.31■□□□□ 0.04
LTBR-202ENST00000440421 INO80BQ9C086 356 aaPredicted RBP15.31■□□□□ 0.04
LTBR-202ENST00000440421 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 IFT122Q9HBG6 1241 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
LTBR-202ENST00000440421 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
LTBR-202ENST00000440421 GAS2O43903 313 aaKnown RBP15.3■□□□□ 0.04
LTBR-202ENST00000440421 USO1O60763 962 aaKnown RBP15.3■□□□□ 0.04
LTBR-202ENST00000440421 DGAT1O75907 488 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms