RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 MX1P20591 662 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 KLRC2P26717 231 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 ALDH7A1P49419 539 aaKnown RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 SPEM2Q0P670 501 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 LONRF3Q496Y0 759 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 IFIT1BQ5T764 474 aaKnown RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 PHLDB3Q6NSJ2 640 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 COL26A1Q96A83 441 aa11.17□□□□□ -0.62
SMPD4-208ENST00000439029 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 MTF2Q9Y483 593 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 PNMA6FA0A0J9YX94 578 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 PALM3A6NDB9 673 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 SPTLC1O15269 473 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 HOXA2O43364 376 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 CYTH3O43739 400 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 ZC3H11AO75152 810 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 VTNP04004 478 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 CTSAP10619 480 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 STAT5BP51692 787 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 SNW1Q13573 536 aaKnown RBP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 NONOQ15233 471 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 C20orf194Q5TEA3 1177 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 TRMT1LQ7Z2T5 733 aaKnown RBP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 EVI5LQ96CN4 794 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 GPRASP2Q96D09 838 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 KLHL5Q96PQ7 755 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
SMPD4-208ENST00000439029 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 ANKRD11Q6UB99 2663 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-208ENST00000439029 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 MTMR1Q13613 665 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 UBXN2BQ14CS0 331 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 WTAPQ15007 396 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 ODR4Q5SWX8 454 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 CUL5Q93034 780 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 RPP25Q9BUL9 199 aaKnown RBP11.15□□□□□ -0.62
SMPD4-208ENST00000439029 VN1R3Q9BXE9 311 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 BCO2Q9BYV7 579 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 RIOX1Q9H6W3 641 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 GMEB2Q9UKD1 530 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 ANGPTL2Q9UKU9 493 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 PCDHGA2Q9Y5H1 932 aa11.15□□□□□ -0.62
SMPD4-208ENST00000439029 MIA3Q5JRA6 1907 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CCDC195A0A1B0GUA6 201 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 C2CD2LO14523 706 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 MEIS2O14770 477 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 SLC30A4O14863 429 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 RFPL2O75678 378 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CNPP09543 421 aaKnown RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 ZSCAN20P17040 1043 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CD72P21854 359 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 FGFR4P22455 802 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CLCN4P51793 760 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CRYBB1P53674 252 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 ACTR2P61160 394 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 GPC5P78333 572 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 HNRNPUQ00839 825 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 DDX53Q86TM3 631 aaKnown RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 METTL13Q8N6R0 699 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 BBXQ8WY36 941 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 IGSF21Q96ID5 467 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 EPC1Q9H2F5 836 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 WDR6Q9NNW5 1121 aaKnown RBP11.14□□□□□ -0.63
SMPD4-208ENST00000439029 MAN1C1Q9NR34 630 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 EPS15L1Q9UBC2 864 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 FBXO4Q9UKT5 387 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 NUMBLQ9Y6R0 609 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 LAMA4Q16363 1823 aa11.14□□□□□ -0.63
SMPD4-208ENST00000439029 CLUHO75153 1309 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 FAM170BA6NMN3 283 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 DDX39AO00148 427 aaKnown RBP11.13□□□□□ -0.63
SMPD4-208ENST00000439029 GDF9O60383 454 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 GPR32O75388 356 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 STARD6P59095 220 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 TRAF1Q13077 416 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 GRM4Q14833 912 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 UBE2SQ16763 222 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 N4BP2L1Q5TBK1 243 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-208ENST00000439029 GET4Q7L5D6 327 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-208ENST00000439029 PLPPR4Q7Z2D5 763 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 PPFIBP1Q86W92 1011 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 ZBTB44Q8NCP5 570 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 NETO1Q8TDF5 533 aa11.13□□□□□ -0.63
SMPD4-208ENST00000439029 SMG7Q92540 1137 aaKnown RBP11.13□□□□□ -0.63
SMPD4-208ENST00000439029 TNPO1Q92973 898 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms