RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PURAQ00577 322 aaKnown RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ADAM9Q13443 819 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 NOLC1Q14978 699 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZMYM1Q5SVZ6 1142 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 PRAMEF9Q5VWM5 478 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 LILRA6Q6PI73 481 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 BMP8AQ7Z5Y6 402 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZSWIM9Q86XI8 627 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 CCAR1Q8IX12 1150 aaKnown RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 LINC00482Q8N8I6 264 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 CALML6Q8TD86 181 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ERCC4Q92889 916 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 FERMT2Q96AC1 680 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 CLIP3Q96DZ5 547 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 SOX7Q9BT81 388 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 CHMP4AQ9BY43 222 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 GTPBP4Q9BZE4 634 aaKnown RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 OR10A5Q9H207 317 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 IFT122Q9HBG6 1241 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 NMRK2Q9NPI5 230 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ARHGAP28Q9P2N2 729 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 DDX20Q9UHI6 824 aaKnown RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 DBR1Q9UK59 544 aaKnown RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 EDARQ9UNE0 448 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 IPPQ9Y573 584 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 PCDHA5Q9Y5H7 936 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 CARMIL2Q6F5E8 1435 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 MYOCOSA0A1B0GUC4 107 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 A6NNZ2 444 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 CUTAO60888 179 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 IL33O95760 270 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 MYL1P05976 194 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 NCAM1P13591 858 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 ATF2P15336 505 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 APEX1P27695 318 aaKnown RBP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 FXR1P51114 621 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 USP14P54578 494 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 ITGA1P56199 1179 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 LGALS4P56470 323 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 NKX3-2P78367 333 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 GRM3Q14832 879 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 ADRM1Q16186 407 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 SKIDA1Q1XH10 827 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 TMEM200BQ69YZ2 307 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 VASNQ6EMK4 673 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 CXXC5Q7LFL8 322 aaKnown RBP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 TMC6Q7Z403 805 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 B3GNT8Q7Z7M8 397 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 OR14C36Q8NHC7 312 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 DIS3LQ8TF46 1054 aaKnown RBP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLC2A13Q96QE2 648 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 TMEM209Q96SK2 561 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 FDXACB1Q9BRP7 624 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 SARGQ9BW04 601 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 CSRNP2Q9H175 543 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 MTG2Q9H4K7 406 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 CNTD2Q9H8S5 307 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 KCMF1Q9P0J7 381 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 DPP7Q9UHL4 492 aa4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 EVLQ9UI08 416 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 MBD1Q9UIS9 605 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P27-201ENST00000431429 HRGP04196 525 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 CHGBP05060 677 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 CT47B1P0C2W7 299 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 HSPA6P17066 643 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 MC3RP41968 323 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 CDR1P51861 262 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 PPP3CAQ08209 521 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 NFATC3Q12968 1075 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 MALLQ13021 153 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 SPIDRQ14159 915 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZNF267Q14586 743 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 ACAP2Q15057 778 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 CLUL1Q15846 466 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 PRR31Q5SQ13 230 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 OLFML2BQ68BL8 750 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 USP45Q70EL2 814 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 GAREM2Q75VX8 874 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZC3H18Q86VM9 953 aaKnown RBP4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 LDHDQ86WU2 507 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 IGDCC3Q8IVU1 814 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 THEMISQ8N1K5 641 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 CDYL2Q8N8U2 506 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 OR5AN1Q8NGI8 311 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 HOXB13Q92826 284 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 RPGRQ92834 1020 aaKnown RBP4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 PMM1Q92871 262 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 TIFAQ96CG3 184 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 SYT3Q9BQG1 590 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 GORASP1Q9BQQ3 440 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 PCDH18Q9HCL0 1135 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 GCM1Q9NP62 436 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 C1orf112Q9NSG2 853 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 FTSJ1Q9UET6 329 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 DNM3Q9UQ16 869 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 PCDHB6Q9Y5E3 794 aa4.11□□□□□ -1.75
HMGB1P27-201ENST00000431429 ST20-MTHFSA0A0A6YYL1 179 aa4.1□□□□□ -1.75
HMGB1P27-201ENST00000431429 TEX51A0A1B0GUA7 166 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms