RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OTUD6AQ7L8S5 288 aa18.28■□□□□ 0.52
USHBP1-203ENST00000431146 HAUS6Q7Z4H7 955 aa18.28■□□□□ 0.52
USHBP1-203ENST00000431146 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
USHBP1-203ENST00000431146 BORCS6Q96GS4 357 aa18.28■□□□□ 0.52
USHBP1-203ENST00000431146 LRRC37A2A6NM11 1700 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 CCDC169A6NNP5 214 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 URI1O94763 535 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-203ENST00000431146 EDNRBP24530 442 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 CASQ1P31415 396 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 PSMC2P35998 433 aaKnown RBP18.27■□□□□ 0.52
USHBP1-203ENST00000431146 CYP27A1Q02318 531 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 PDXDC1Q6P996 788 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 BSNDQ8WZ55 320 aa18.27■□□□□ 0.52
USHBP1-203ENST00000431146 METTL14Q9HCE5 456 aaKnown RBP18.27■□□□□ 0.52
USHBP1-203ENST00000431146 ZNF215Q9UL58 517 aaPredicted RBP18.27■□□□□ 0.52
USHBP1-203ENST00000431146 SYNGAP1Q96PV0 1343 aa18.27■□□□□ 0.51
USHBP1-203ENST00000431146 SLC25A27O95847 323 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 MTERF2Q49AM1 385 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 ZSWIM2Q8NEG5 633 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 FGD4Q96M96 766 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 DMAC2Q9NW81 257 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 CEP72Q9P209 647 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.26■□□□□ 0.51
USHBP1-203ENST00000431146 V9GYY5 206 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-203ENST00000431146 CTIFO43310 598 aaKnown RBP18.26■□□□□ 0.51
USHBP1-203ENST00000431146 ATP4AP20648 1035 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 HNRNPH3P31942 346 aaKnown RBP18.26■□□□□ 0.51
USHBP1-203ENST00000431146 CYLC1P35663 651 aaPredicted RBP18.26■□□□□ 0.51
USHBP1-203ENST00000431146 NFIL3Q16649 462 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 LY6KQ17RY6 165 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 ZNF569Q5MCW4 686 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 LRRN4CLQ8ND94 238 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 MMP19Q99542 508 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 PORCNQ9H237 461 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 CYP26B1Q9NR63 512 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 FRMD4BQ9Y2L6 1034 aa18.26■□□□□ 0.51
USHBP1-203ENST00000431146 KIF5CO60282 957 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 EXOC3O60645 756 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 TRIM49P0CI25 452 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 TRIM49CP0CI26 452 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 EIF4A3P38919 411 aaKnown RBP18.25■□□□□ 0.51
USHBP1-203ENST00000431146 NPTX2P47972 431 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 CCDC42Q96M95 316 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 CBWD1Q9BRT8 395 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 GANQ9H2C0 597 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 EFCC1Q9HA90 598 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 ZNF302Q9NR11 478 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 GUCA1BQ9UMX6 200 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 RCCD1A6NED2 376 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 ZNF263O14978 683 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
USHBP1-203ENST00000431146 MAPTP10636 758 aaKnown RBP18.25■□□□□ 0.51
USHBP1-203ENST00000431146 NCKAP1LP55160 1127 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 GTF2BQ00403 316 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 ARID5AQ03989 594 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 KCTD2Q14681 263 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 EXOC3L4Q17RC7 722 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 TIPINQ9BVW5 301 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 L2HGDHQ9H9P8 463 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 XPNPEP1Q9NQW7 623 aa18.25■□□□□ 0.51
USHBP1-203ENST00000431146 SOCS7O14512 581 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 TLR2O60603 784 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 DKC1O60832 514 aaKnown RBP eCLIP18.24■□□□□ 0.51
USHBP1-203ENST00000431146 ARIH2O95376 493 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 PON1P27169 355 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 CDK17Q00537 523 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 ENOX2Q16206 610 aaKnown RBP18.24■□□□□ 0.51
USHBP1-203ENST00000431146 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 CCDC170Q8IYT3 715 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 TMEM206Q9H813 350 aa18.24■□□□□ 0.51
USHBP1-203ENST00000431146 TULP1O00294 542 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-203ENST00000431146 ATG7O95352 703 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 PPP2R3AQ06190 1150 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 DMP1Q13316 513 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-203ENST00000431146 RAPGEF1Q13905 1077 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 KIAA1328Q86T90 577 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 TMEM161BQ8NDZ6 487 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 LACRTQ9GZZ8 138 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 DEF6Q9H4E7 631 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 KMT5AQ9NQR1 393 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 GCNT4Q9P109 453 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 GSTTP1A0A1W2PQM5 241 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
USHBP1-203ENST00000431146 GGPS1O95749 300 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 KIF11P52732 1056 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 ALCAMQ13740 583 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
USHBP1-203ENST00000431146 XKR3Q5GH77 459 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 SFMBT2Q5VUG0 894 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 HGSNATQ68CP4 663 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 GJB7Q6PEY0 223 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-203ENST00000431146 PCYT2Q99447 389 aa18.23■□□□□ 0.51
USHBP1-203ENST00000431146 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms