RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CSPG5O95196 566 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 BMPR1AP36894 532 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 DSC3Q14574 896 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 PPP4R3AQ6IN85 833 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 ANO5Q75V66 913 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 RDM1Q8NG50 284 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 ADAMTS19Q8TE59 1207 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 CLP1Q92989 425 aaKnown RBP19.01■□□□□ 0.63
UBE3D-204ENST00000430071 MRPL38Q96DV4 380 aaKnown RBP19.01■□□□□ 0.63
UBE3D-204ENST00000430071 SAMD11Q96NU1 681 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 NIFKQ9BYG3 293 aaKnown RBP19.01■□□□□ 0.63
UBE3D-204ENST00000430071 CEP131Q9UPN4 1083 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 VPS37CA5D8V6 355 aaPredicted RBP19■□□□□ 0.63
UBE3D-204ENST00000430071 C9IYK1 514 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 ZBTB39O15060 712 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 NPEPPSP55786 919 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 PPP2R5CQ13362 524 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 GNL2Q13823 731 aaKnown RBP19■□□□□ 0.63
UBE3D-204ENST00000430071 FAM102BQ5T8I3 360 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 HLA-CQ95604 372 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 RGS18Q9NS28 235 aa19■□□□□ 0.63
UBE3D-204ENST00000430071 SARSP49591 514 aaKnown RBP18.99■□□□□ 0.63
UBE3D-204ENST00000430071 GPC3P51654 580 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 SPIRE1Q08AE8 756 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 TBC1D8BQ0IIM8 1120 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 XKR3Q5GH77 459 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 SYMPKQ92797 1274 aaKnown RBP18.99■□□□□ 0.63
UBE3D-204ENST00000430071 FAM20AQ96MK3 541 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 ALG13Q9NP73 1137 aaKnown RBP18.99■□□□□ 0.63
UBE3D-204ENST00000430071 RGL1Q9NZL6 768 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 MTMR6Q9Y217 621 aa18.99■□□□□ 0.63
UBE3D-204ENST00000430071 IGKV6-21A0A0C4DH24 114 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 C5orf67F2Z3F1 127 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 GPR182O15218 404 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 GCFC2P16383 781 aaKnown RBP18.98■□□□□ 0.63
UBE3D-204ENST00000430071 DNAJB1P25685 340 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 CAMK1Q14012 370 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 TCEAL5Q5H9L2 206 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 KSR1Q8IVT5 923 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 MAP7D2Q96T17 732 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 RNF19AQ9NV58 838 aa18.98■□□□□ 0.63
UBE3D-204ENST00000430071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-204ENST00000430071 DENND3A2RUS2 1198 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 STX6O43752 255 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 FGFR1P11362 822 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 EIF4BP23588 611 aaKnown RBP18.97■□□□□ 0.63
UBE3D-204ENST00000430071 TMOD1P28289 359 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 PSMC5P62195 406 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 FAM189BP81408 668 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 NCAPH2Q6IBW4 605 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 CMTR2Q8IYT2 770 aaKnown RBP18.97■□□□□ 0.63
UBE3D-204ENST00000430071 DYDC2Q96IM9 177 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 BMP2KQ9NSY1 1161 aaPredicted RBP18.97■□□□□ 0.63
UBE3D-204ENST00000430071 LRFN2Q9ULH4 789 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 COG5Q9UP83 839 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 PCDHB7Q9Y5E2 793 aa18.97■□□□□ 0.63
UBE3D-204ENST00000430071 A0A087WZ62 844 aa18.96■□□□□ 0.63
UBE3D-204ENST00000430071 ITGB1P05556 798 aa18.96■□□□□ 0.63
UBE3D-204ENST00000430071 STAG3L1P0CL83 205 aa18.96■□□□□ 0.63
UBE3D-204ENST00000430071 DARSP14868 501 aaKnown RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 ATP2B1P20020 1258 aa18.96■□□□□ 0.63
UBE3D-204ENST00000430071 GTF2F1P35269 517 aaKnown RBP eCLIP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 ANP32AP39687 249 aaKnown RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 QARSP47897 775 aaKnown RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 TOB1P50616 345 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 CTTNQ14247 550 aaKnown RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 SLC24A5Q71RS6 500 aa18.96■□□□□ 0.63
UBE3D-204ENST00000430071 UHRF1Q96T88 793 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 FDXACB1Q9BRP7 624 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 UBE2ZQ9H832 354 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-204ENST00000430071 A0A087WWV3 80 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 TBKBP1A7MCY6 615 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 TBX3O15119 743 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 MAFO75444 373 aaPredicted RBP18.95■□□□□ 0.62
UBE3D-204ENST00000430071 RB1P06400 928 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 CYP4A11Q02928 519 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 RESTQ13127 1097 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 PKP1Q13835 747 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 EPHA7Q15375 998 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 KLHL23Q8NBE8 558 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 NLRP7Q8WX94 980 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 TMEM60Q9H2L4 133 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
UBE3D-204ENST00000430071 PCDHGC5Q9Y5F6 944 aa18.95■□□□□ 0.62
UBE3D-204ENST00000430071 TNFRSF10AO00220 468 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 P4HBP07237 508 aaKnown RBP18.94■□□□□ 0.62
UBE3D-204ENST00000430071 NBR1Q14596 966 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 PTPROQ16827 1216 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 SPPL3Q8TCT6 385 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 SCLT1Q96NL6 688 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 NAP1L4Q99733 375 aaKnown RBP18.94■□□□□ 0.62
UBE3D-204ENST00000430071 LXNQ9BS40 222 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 CYP26B1Q9NR63 512 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 C1orf112Q9NSG2 853 aa18.94■□□□□ 0.62
UBE3D-204ENST00000430071 SUCLA2Q9P2R7 463 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-204ENST00000430071 MARCH6O60337 910 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 KCNA5P22460 613 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms