RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DDHD2O94830 711 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SYF2O95926 243 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 RALBP11234 206 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SERPINB6P35237 376 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 LONP1P36776 959 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 GUCA1AP43080 201 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 CHMP1BQ7LBR1 199 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 RELL1Q8IUW5 271 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 MFN1Q8IWA4 741 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KRT222Q8N1A0 295 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 NSUN6Q8TEA1 469 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 POLR3CQ9BUI4 534 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 CALN1Q9BXU9 219 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 PCIF1Q9H4Z3 704 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SUN2Q9UH99 717 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 DDX41Q9UJV9 622 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 PCDHA4Q9UN74 947 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 POM121CA8CG34 1229 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KCNK3O14649 394 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 PDIA3P30101 505 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 CENPAP49450 140 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 VPS41P49754 854 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 POLR2FP61218 127 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 MTMR1Q13613 665 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 MORC3Q14149 939 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ZNF235Q14590 738 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 CYP4A22Q5TCH4 519 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 PHLDB3Q6NSJ2 640 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 RHPN2Q8IUC4 686 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 IQCF2Q8IXL9 164 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 TTC39CQ8N584 583 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ZNF280CQ8ND82 737 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 PRIMPOLQ96LW4 560 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SPON2Q9BUD6 331 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 PPP1R12CQ9BZL4 782 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ABCB11O95342 1321 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 TBC1D12O60347 775 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ZBED1O96006 694 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 HSPA1AP0DMV8 641 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 HSPA1BP0DMV9 641 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 SLC16A2P36021 539 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 DEUP1Q05D60 604 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 C16orf62Q7Z3J2 963 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ZSCAN18Q8TBC5 510 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 CSGALNACT1Q8TDX6 532 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 USP33Q8TEY7 942 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 YME1L1Q96TA2 773 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 AP1M1Q9BXS5 423 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 PCDHB9Q9Y5E1 797 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SNX5Q9Y5X3 404 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ZNF335Q9H4Z2 1342 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 H7C4K7 107 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 AFPP02771 609 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 SKIP12755 728 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 VCLP18206 1134 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 CHMLP26374 656 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 MSH2P43246 934 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 CDO1Q16878 200 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 FAM26FQ5R3K3 315 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 TTC39BQ5VTQ0 682 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 ERICH1Q86X53 443 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 LRRC8CQ8TDW0 803 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 GJA10Q969M2 543 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 TBC1D2Q9BYX2 928 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 ACAD9Q9H845 621 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 DDX56Q9NY93 547 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 KIF17Q9P2E2 1029 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KLHL8Q9P2G9 620 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 STAP1Q9ULZ2 295 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 TRAPPC8Q9Y2L5 1435 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KCNJ18B7U540 433 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 HGSO14964 777 aaPredicted RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 SYNCRIPO60506 623 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 BAG2O95816 211 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 FDX1P10109 184 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 DYNLT1P63172 113 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SKOR1P84550 965 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KCNJ12Q14500 433 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 SYT10Q6XYQ8 523 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 CACTIN-AS1Q8N1I8 211 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 MB21D1Q8N884 522 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 MYRIPQ8NFW9 859 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 TTC8Q8TAM2 541 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 MUC3BQ9H195 1237 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KIAA1586Q9HCI6 787 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 RAD18Q9NS91 495 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 DNAJC17Q9NVM6 304 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 THG1LQ9NWX6 298 aaKnown RBP6.12□□□□□ -1.43
HERC4-206ENST00000427635 SPACA6W5XKT8 324 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KDM6BO15054 1643 aa6.12□□□□□ -1.43
HERC4-206ENST00000427635 KDM5DQ9BY66 1539 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 TNKSO95271 1327 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 LRRC53A6NM62 1247 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 STXBP3O00186 592 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 ERN1O75460 977 aaKnown RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 MX2P20592 715 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 HOXA7P31268 230 aaPredicted RBP6.11□□□□□ -1.43
HERC4-206ENST00000427635 ART3Q13508 389 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 BFSP2Q13515 415 aa6.11□□□□□ -1.43
HERC4-206ENST00000427635 SCFD1Q8WVM8 642 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms