RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 THEMIS2Q5TEJ8 643 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 ANGEL2Q5VTE6 544 aaKnown RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 SMAP1Q8IYB5 467 aaPredicted RBP14.12□□□□□ -0.15
SPG11-202ENST00000427534 TMEM47Q9BQJ4 181 aa14.12□□□□□ -0.15
SPG11-202ENST00000427534 HOXD10P28358 340 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 TTLL4Q14679 1199 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 RNF25Q96BH1 459 aaPredicted RBP14.11□□□□□ -0.15
SPG11-202ENST00000427534 TTC1Q99614 292 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 ECEL1O95672 775 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 OCRLQ01968 901 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 ZNF211Q13398 564 aaPredicted RBP14.11□□□□□ -0.15
SPG11-202ENST00000427534 SLC9A5Q14940 896 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 TBCCQ15814 346 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 RBBP7Q16576 425 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 MAPK6Q16659 721 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 CDHR1Q96JP9 859 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 GJD4Q96KN9 370 aaPredicted RBP14.11□□□□□ -0.15
SPG11-202ENST00000427534 SEPT5Q99719 369 aaPredicted RBP14.11□□□□□ -0.15
SPG11-202ENST00000427534 IFNAR1P17181 557 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 CDC25BP30305 580 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 GABPB1Q06547 395 aaPredicted RBP14.11□□□□□ -0.15
SPG11-202ENST00000427534 SCARF1Q14162 830 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 SLC13A4Q9UKG4 626 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 RARBP10826 455 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 LIG3P49916 1009 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 BPIFB4P59827 614 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 PADI6Q6TGC4 694 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 SAMD7Q7Z3H4 446 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 ASIC4Q96FT7 647 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 TTC4O95801 387 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 ATN1P54259 1190 aaPredicted RBP14.11□□□□□ -0.15
SPG11-202ENST00000427534 PODNQ7Z5L7 613 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 PIP4K2CQ8TBX8 421 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 HPS3Q969F9 1004 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 AK8Q96MA6 479 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 DNAJC6O75061 913 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 CIITAP33076 1130 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 SHROOM2Q13796 1616 aa14.11□□□□□ -0.15
SPG11-202ENST00000427534 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 IKBKBO14920 756 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 ERFP50548 548 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 C11orf74Q86VG3 221 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 TMEM143Q96AN5 459 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 ABCC3O15438 1527 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
SPG11-202ENST00000427534 PDGFRBP09619 1106 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 PRELPP51888 382 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 BLVRAP53004 296 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 HVCN1Q96D96 273 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 ANAPC7Q9UJX3 599 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 PCDHA13Q9Y5I0 950 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 ABCC12Q96J65 1359 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 HNRNPCL2B2RXH8 293 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 HNRNPCL1O60812 293 aaKnown RBP14.1□□□□□ -0.15
SPG11-202ENST00000427534 KCNJ6P48051 423 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 STAG2Q8N3U4 1231 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 CPDO75976 1380 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 PRPF3O43395 683 aaKnown RBP14.1□□□□□ -0.15
SPG11-202ENST00000427534 GSPT2Q8IYD1 628 aaKnown RBP14.1□□□□□ -0.15
SPG11-202ENST00000427534 SP110Q9HB58 689 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 GTSE1Q9NYZ3 720 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 PACSIN2Q9UNF0 486 aaPredicted RBP14.1□□□□□ -0.15
SPG11-202ENST00000427534 RGS7P49802 495 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 CC2D1AQ6P1N0 951 aaPredicted RBP14.1□□□□□ -0.15
SPG11-202ENST00000427534 CYTH2Q99418 400 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 SPON1Q9HCB6 807 aa14.1□□□□□ -0.15
SPG11-202ENST00000427534 A8MXQ7 604 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 E5RI56 91 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 SLFN14P0C7P3 912 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 PHKA2P46019 1235 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 SLC10A5Q5PT55 438 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 NR1H4Q96RI1 486 aaPredicted RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 C11orf70Q9BRQ4 267 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 CAPS2Q9BXY5 557 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 RASSF4Q9H2L5 321 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 KCNH4Q9UQ05 1017 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 hCG_1984214I3L0E3 225 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 MT-ND3P03897 115 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 TXNP10599 105 aaKnown RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 GFPT1Q06210 699 aaPredicted RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 EZH2Q15910 746 aaKnown RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 ZNF713Q8N859 430 aaPredicted RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 DHTKD1Q96HY7 919 aaPredicted RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 DAAM1Q9Y4D1 1078 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 KBTBD13C9JR72 458 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 H3BRJ5 948 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 TCP1P17987 556 aaKnown RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 EEF1B2P24534 225 aaKnown RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 RESTQ13127 1097 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 TRIM59Q8IWR1 403 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 MRPL42Q9Y6G3 142 aaKnown RBP14.09□□□□□ -0.15
SPG11-202ENST00000427534 SNX2O60749 519 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 KRT10P13645 584 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 NFIXQ14938 502 aa14.09□□□□□ -0.15
SPG11-202ENST00000427534 KIAA1755Q5JYT7 1200 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms