RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 C22orf31O95567 290 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CCNE2O96020 404 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 JAK3P52333 1124 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RNASELQ05823 741 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 APOBRQ0VD83 1088 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PRR16Q569H4 304 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 IER5LQ5T953 404 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 EXOC8Q8IYI6 725 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PRSS33Q8NF86 280 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ACSF2Q96CM8 615 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CASD1Q96PB1 797 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 APOL5Q9BWW9 433 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ADAM7Q9H2U9 754 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 DISC1Q9NRI5 854 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 DZANK1Q9NVP4 752 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 DBR1Q9UK59 544 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CNTNAP5Q8WYK1 1306 aa13.85□□□□□ -0.19
HLA-DQB3-203ENST00000425319 BAZ2BQ9UIF8 2168 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 A0A0U1RQF3 1178 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ESYT2A0FGR8 921 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 FAM86B1E9PN63 330 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 DHX15O43143 795 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 DKC1O60832 514 aaKnown RBP eCLIP13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 FAM86B2P0C5J1 330 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 FOXK2Q01167 660 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 EXOSC10Q01780 885 aaKnown RBP13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 KREMEN2Q8NCW0 462 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TMEM40Q8WWA1 233 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PGBD4Q96DM1 585 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 RIT2Q99578 217 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TEKT3Q9BXF9 490 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 S1PR5Q9H228 398 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 DPP7Q9UHL4 492 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 PCDHGC5Q9Y5F6 944 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 TTC3P53804 2025 aa13.84□□□□□ -0.19
HLA-DQB3-203ENST00000425319 XIRP2A4UGR9 3374 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RBAK-RBAKDNI3L0D1 243 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 GAS7O60861 476 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 OATP04181 439 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 USP11P51784 963 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CLCN3P51790 818 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 DSC3Q14574 896 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 GLB1LQ6UWU2 654 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TDRD5Q8NAT2 981 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 FAM193BQ96PV7 902 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 EMILIN2Q9BXX0 1053 aa13.83□□□□□ -0.2
HLA-DQB3-203ENST00000425319 DARSP14868 501 aaKnown RBP13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ATP4AP20648 1035 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CIITAP33076 1130 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RAB27AP51159 221 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NLRP5P59047 1200 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NONOQ15233 471 aaKnown RBP eCLIP13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TWF2Q6IBS0 349 aaKnown RBP13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SYCE2Q6PIF2 218 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CABP7Q86V35 215 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TRIM22Q8IYM9 498 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 VPS52Q8N1B4 723 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RDM1Q8NG50 284 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 URGCPQ8TCY9 931 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
HLA-DQB3-203ENST00000425319 NLRC5Q86WI3 1866 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 IGLV3-22A0A075B6J6 115 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 C2orf71A6NGG8 1288 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 HIDE1A8MVS5 230 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 H0Y858 1186 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ALDH2P05091 517 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 RFX1P22670 979 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 PSMA5P28066 241 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 GPC3P51654 580 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 BCAR1P56945 870 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TCF15Q12870 199 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 LRCH2Q5VUJ6 765 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 TYW1BQ6NUM6 668 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 OTOP3Q7RTS5 596 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 MIER3Q7Z3K6 550 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ZDHHC14Q8IZN3 488 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 SLC39A11Q8N1S5 342 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 HELQQ8TDG4 1101 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ASIC4Q96FT7 647 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 CCDC136Q96JN2 1154 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 ADAMTS10Q9H324 1103 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 HCFC2Q9Y5Z7 792 aa13.81□□□□□ -0.2
HLA-DQB3-203ENST00000425319 BRWD1Q9NSI6 2320 aa13.8□□□□□ -0.2
HLA-DQB3-203ENST00000425319 MUC6Q6W4X9 2439 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms