RNA–Protein interactions for RNA: ENST00000424369.5

TRIM6-204, Transcript of tripartite motif containing 6, humanhuman

TSL 3

Gene TRIM6, Length 468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-204ENST00000424369 SLC28A3Q9HAS3 691 aa11.74□□□□□ -0.53
TRIM6-204ENST00000424369 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
TRIM6-204ENST00000424369 VWA3AA6NCI4 1184 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 EPOPA6NHQ4 379 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 STX6O43752 255 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 DKC1O60832 514 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM6-204ENST00000424369 AMHP03971 560 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 DARSP14868 501 aaKnown RBP11.73□□□□□ -0.53
TRIM6-204ENST00000424369 PDCP20941 246 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 RPA1P27694 616 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 RARRES1P49788 294 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 GATMP50440 423 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 DNM2P50570 870 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 TAP1Q03518 808 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 PKP1Q13835 747 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 PDIA5Q14554 519 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 EMC2Q15006 297 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 SF3A1Q15459 793 aaKnown RBP11.73□□□□□ -0.53
TRIM6-204ENST00000424369 ZRSR1Q15695 479 aaKnown RBP11.73□□□□□ -0.53
TRIM6-204ENST00000424369 APBB2Q92870 758 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 NLRP4Q96MN2 994 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 ADAM2Q99965 735 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 TUFT1Q9NNX1 390 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 GPRC5CQ9NQ84 441 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 ANKEF1Q9NU02 776 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 KIAA1024Q9UPX6 916 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 SQORQ9Y6N5 450 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
TRIM6-204ENST00000424369 MICAL3Q7RTP6 2002 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 E9PMD0 336 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 USO1O60763 962 aaKnown RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 EFCAB14O75071 495 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 RPLP2P05387 115 aaKnown RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 EIF4BP23588 611 aaKnown RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 PRPHP41219 470 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 LAMTOR4Q0VGL1 99 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 FOXD4L6Q3SYB3 417 aaPredicted RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 FOXD4L3Q6VB84 417 aaPredicted RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 KCNK18Q7Z418 384 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 BRAPQ7Z569 592 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 ASAP3Q8TDY4 903 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 NACC1Q96RE7 527 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 RAD9AQ99638 391 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 IFT122Q9HBG6 1241 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 DDX19AQ9NUU7 478 aaKnown RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
TRIM6-204ENST00000424369 MTUS1Q9ULD2 1270 aa11.72□□□□□ -0.53
TRIM6-204ENST00000424369 CDH23Q9H251 3354 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 LAD1O00515 517 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 GPR182O15218 404 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 HSP90AA1P07900 732 aaKnown RBP11.71□□□□□ -0.53
TRIM6-204ENST00000424369 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRIM6-204ENST00000424369 MARCKSP29966 332 aaPredicted RBP11.71□□□□□ -0.53
TRIM6-204ENST00000424369 RFC5P40937 340 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 HTRA4P83105 476 aaPredicted RBP11.71□□□□□ -0.53
TRIM6-204ENST00000424369 ADGRE1Q14246 886 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 DSC3Q14574 896 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 PTPAQ15257 358 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 ARNTL2Q8WYA1 636 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 PNMA5Q96PV4 448 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 MTRQ99707 1265 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 GCOM2Q9BZD3 368 aaPredicted RBP11.71□□□□□ -0.53
TRIM6-204ENST00000424369 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
TRIM6-204ENST00000424369 COL4A3BPQ9Y5P4 624 aa11.71□□□□□ -0.53
TRIM6-204ENST00000424369 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 LINC01553A4QN01 128 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 GLRA2P23416 452 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 ARL2P36404 184 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 GRB10Q13322 594 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 USP49Q70CQ1 688 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 LRRC15Q8TF66 581 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
TRIM6-204ENST00000424369 CHAMP1Q96JM3 812 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 YME1L1Q96TA2 773 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 C17orf80Q9BSJ5 609 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 FTHL17Q9BXU8 183 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
TRIM6-204ENST00000424369 BHMT2Q9H2M3 363 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 DBR1Q9UK59 544 aaKnown RBP11.7□□□□□ -0.54
TRIM6-204ENST00000424369 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 TTC3P53804 2025 aa11.7□□□□□ -0.54
TRIM6-204ENST00000424369 CHD7Q9P2D1 2997 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms