RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 SAMM50Q9Y512 469 aa12.99□□□□□ -0.33
NCDN-204ENST00000423723 SIP14410 1827 aa12.99□□□□□ -0.33
NCDN-204ENST00000423723 REV3LO60673 3130 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 CUL9Q8IWT3 2517 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 WNT7AO00755 349 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
NCDN-204ENST00000423723 MAFO75444 373 aaPredicted RBP12.98□□□□□ -0.33
NCDN-204ENST00000423723 LYPLA2O95372 231 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 P4HBP07237 508 aaKnown RBP12.98□□□□□ -0.33
NCDN-204ENST00000423723 U2AF2P26368 475 aaKnown RBP eCLIP12.98□□□□□ -0.337e-6■■□□□ 14.4
NCDN-204ENST00000423723 CD52P31358 61 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
NCDN-204ENST00000423723 CDC42EP1Q00587 391 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 EFCAB12Q6NXP0 572 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 SPRED2Q7Z698 418 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 CKAP2LQ8IYA6 745 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 MYOCDQ8IZQ8 938 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 SAMD11Q96NU1 681 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
NCDN-204ENST00000423723 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
NCDN-204ENST00000423723 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 M0QZ92 97 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 DGKIO75912 1065 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 SLITRK3O94933 977 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 TMOD1P28289 359 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 TRIM29Q14134 588 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 DSC3Q14574 896 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 ODR4Q5SWX8 454 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 SLC17A8Q8NDX2 589 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 CLP1Q92989 425 aaKnown RBP12.97□□□□□ -0.33
NCDN-204ENST00000423723 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
NCDN-204ENST00000423723 NUP62CLQ9H1M0 184 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 RGS18Q9NS28 235 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 WRAP73Q9P2S5 460 aaPredicted RBP12.97□□□□□ -0.33
NCDN-204ENST00000423723 NOC2LQ9Y3T9 749 aaKnown RBP12.97□□□□□ -0.33
NCDN-204ENST00000423723 XIRP2A4UGR9 3374 aa12.97□□□□□ -0.33
NCDN-204ENST00000423723 C5orf67F2Z3F1 127 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 GPR182O15218 404 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 CHMP2AO43633 222 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 TRAPPC10P48553 1259 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 GPC3P51654 580 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 TMEM62Q0P6H9 643 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 RNF214Q8ND24 703 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 C8orf76Q96K31 380 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
NCDN-204ENST00000423723 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 PCDHA12Q9UN75 941 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 ST3GAL5Q9UNP4 418 aa12.96□□□□□ -0.33
NCDN-204ENST00000423723 MUC3AQ02505 3323 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 C9IYK1 514 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 RFXAPO00287 272 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 MGEA5O60502 916 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 VTNP04004 478 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 RB1P06400 928 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 EIF4BP23588 611 aaKnown RBP12.95□□□□□ -0.34
NCDN-204ENST00000423723 CLCN3P51790 818 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 NLRP11P59045 1033 aaKnown RBP12.95□□□□□ -0.34
NCDN-204ENST00000423723 TBC1D8BQ0IIM8 1120 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 PAK2Q13177 524 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 GRB10Q13322 594 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 SAFBQ15424 915 aaKnown RBP eCLIP12.95□□□□□ -0.34
NCDN-204ENST00000423723 KIZQ2M2Z5 673 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
NCDN-204ENST00000423723 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 NPAS4Q8IUM7 802 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
NCDN-204ENST00000423723 EXOC8Q8IYI6 725 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 METTL13Q8N6R0 699 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 NEK9Q8TD19 979 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
NCDN-204ENST00000423723 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 CLSTN2Q9H4D0 955 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 ELAC1Q9H777 363 aaKnown RBP12.95□□□□□ -0.34
NCDN-204ENST00000423723 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 CYP26B1Q9NR63 512 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 RCOR1Q9UKL0 485 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 NCOR1O75376 2440 aa12.95□□□□□ -0.34
NCDN-204ENST00000423723 H3BNC9 293 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 NEMFO60524 1076 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 DARSP14868 501 aaKnown RBP12.94□□□□□ -0.34
NCDN-204ENST00000423723 LIG1P18858 919 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 SARSP49591 514 aaKnown RBP12.94□□□□□ -0.34
NCDN-204ENST00000423723 DRP2Q13474 957 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 CALCRLQ16602 461 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 SLC24A5Q71RS6 500 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 LRRC71Q8N4P6 559 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 ARNTL2Q8WYA1 636 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
NCDN-204ENST00000423723 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms