RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DSC3Q14574 896 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 UGCGQ16739 394 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 PLPP4Q5VZY2 271 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 PDE12Q6L8Q7 609 aaKnown RBP18.21■□□□□ 0.51
COL18A1-205ENST00000423214 RNF169Q8NCN4 708 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 TBCKQ8TEA7 893 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 NLRP7Q8WX94 980 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 ZNF668Q96K58 619 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-205ENST00000423214 CDCA3Q99618 268 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-205ENST00000423214 UNC45AQ9H3U1 944 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 ENTPD7Q9NQZ7 604 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 CLEC1BQ9P126 229 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 SEPT9Q9UHD8 586 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-205ENST00000423214 EIF4BP23588 611 aaKnown RBP18.2■□□□□ 0.5
COL18A1-205ENST00000423214 PPM1AP35813 382 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 GPC3P51654 580 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 RUFY3Q7L099 469 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 MIER3Q7Z3K6 550 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 RNF135Q8IUD6 432 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 SLC5A5Q92911 643 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 CWH43Q9H720 699 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 PUF60Q9UHX1 559 aaKnown RBP18.2■□□□□ 0.5
COL18A1-205ENST00000423214 PCDHA4Q9UN74 947 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 LZTS1Q9Y250 596 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 USP15Q9Y4E8 981 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-205ENST00000423214 KMT2EQ8IZD2 1858 aa18.2■□□□□ 0.5
COL18A1-205ENST00000423214 PER2O15055 1255 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 DUSP6Q16828 381 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 HERC4Q5GLZ8 1057 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-205ENST00000423214 CPLX2Q6PUV4 134 aaKnown RBP18.19■□□□□ 0.5
COL18A1-205ENST00000423214 RDM1Q8NG50 284 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 MRPS27Q92552 414 aaKnown RBP18.19■□□□□ 0.5
COL18A1-205ENST00000423214 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 TCF25Q9BQ70 676 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 ADAMTS10Q9H324 1103 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
COL18A1-205ENST00000423214 PIEZO1Q92508 2521 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 DEXIO95424 95 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 TDP2O95551 362 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 DARSP14868 501 aaKnown RBP18.18■□□□□ 0.5
COL18A1-205ENST00000423214 EVCP57679 992 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 ERVFC1P60507 584 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 FAM189BP81408 668 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 TOB2Q14106 344 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-205ENST00000423214 MTERF2Q49AM1 385 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 Q4G0T1 1027 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 KCNT2Q6UVM3 1135 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 ECHDC2Q86YB7 292 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 BLIDQ8IZY5 108 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 GJA10Q969M2 543 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 DACT1Q9NYF0 836 aa18.18■□□□□ 0.5
COL18A1-205ENST00000423214 FSCN2O14926 492 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 PSMD10O75832 226 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 FGFR4P22455 802 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 PLCB3Q01970 1234 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 KRT17Q04695 432 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 STK3Q13188 491 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 HFE2Q6ZVN8 426 aa18.17■□□□□ 0.5
COL18A1-205ENST00000423214 PHF7Q9BWX1 381 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-205ENST00000423214 MRPL9Q9BYD2 267 aaKnown RBP18.17■□□□□ 0.5
COL18A1-205ENST00000423214 TDRD15B5MCY1 1934 aaKnown RBP18.17■□□□□ 0.5
COL18A1-205ENST00000423214 EPB41L2O43491 1005 aaKnown RBP18.16■□□□□ 0.5
COL18A1-205ENST00000423214 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL18A1-205ENST00000423214 CA8P35219 290 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 PBX3P40426 434 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 DNM2P50570 870 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
COL18A1-205ENST00000423214 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL18A1-205ENST00000423214 DAGLBQ8NCG7 672 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 HELQQ8TDG4 1101 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 MFSD14AQ96MC6 490 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 GCOM2Q9BZD3 368 aaPredicted RBP18.16■□□□□ 0.5
COL18A1-205ENST00000423214 ZSWIM6Q9HCJ5 1215 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 NGRNQ9NPE2 291 aaKnown RBP18.16■□□□□ 0.5
COL18A1-205ENST00000423214 RNF19AQ9NV58 838 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 PPP4R2Q9NY27 417 aa18.16■□□□□ 0.5
COL18A1-205ENST00000423214 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 EDIL3O43854 480 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 TECP42680 631 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 CDC42EP1Q00587 391 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 TARBP2Q15633 366 aaKnown RBP18.15■□□□□ 0.5
COL18A1-205ENST00000423214 CLLU1OSQ5K130 101 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 GALNT17Q6IS24 598 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 LLGL2Q6P1M3 1020 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 MOXD1Q6UVY6 613 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 LRRC55Q6ZSA7 311 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 TMC7Q7Z402 723 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 FAM177A1Q8N128 213 aaPredicted RBP18.15■□□□□ 0.5
COL18A1-205ENST00000423214 VN1R2Q8NFZ6 395 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 ZNF274Q96GC6 653 aaPredicted RBP18.15■□□□□ 0.5
COL18A1-205ENST00000423214 RPGRIP1Q96KN7 1286 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 KCNH6Q9H252 994 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 SPG21Q9NZD8 308 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
COL18A1-205ENST00000423214 WDFY4Q6ZS81 3184 aa18.15■□□□□ 0.5
COL18A1-205ENST00000423214 DENND4AQ7Z401 1863 aa18.14■□□□□ 0.49
COL18A1-205ENST00000423214 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms