RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SPIRE1Q08AE8 756 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 OTUD6AQ7L8S5 288 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 RTN4RL1Q86UN2 441 aaPredicted RBP24.52■■□□□ 1.52
TRAF4-204ENST00000422344 NPAS4Q8IUM7 802 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 C4orf19Q8IY42 314 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 FIBCD1Q8N539 461 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 NLRP7Q8WX94 980 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 DYDC2Q96IM9 177 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 CEP170P1Q96L14 293 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 TMX1Q9H3N1 280 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 ZSWIM4Q9H7M6 989 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 CYP26B1Q9NR63 512 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 RNF216Q9NWF9 866 aaPredicted RBP24.52■■□□□ 1.52
TRAF4-204ENST00000422344 RGL1Q9NZL6 768 aa24.52■■□□□ 1.52
TRAF4-204ENST00000422344 COL4A6Q14031 1691 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 FAM86C2PA6NEL3 165 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 GPC3P51654 580 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 CDC42EP1Q00587 391 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 CTTNQ14247 550 aaKnown RBP24.51■■□□□ 1.51
TRAF4-204ENST00000422344 FAM228AQ86W67 206 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 NOSTRINQ8IVI9 506 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 TPH2Q8IWU9 490 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 EXOC8Q8IYI6 725 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 SLC7A3Q8WY07 619 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 ZNF668Q96K58 619 aaPredicted RBP24.51■■□□□ 1.51
TRAF4-204ENST00000422344 ADAMTS10Q9H324 1103 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 C1orf112Q9NSG2 853 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 PPME1Q9Y570 386 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 ADGRA3Q8IWK6 1321 aa24.51■■□□□ 1.51
TRAF4-204ENST00000422344 MAFO75444 373 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 KCNA5P22460 613 aa24.5■■□□□ 1.51
TRAF4-204ENST00000422344 EIF4BP23588 611 aaKnown RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 YWHABP31946 246 aaKnown RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 POLGP54098 1239 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 ORC2Q13416 577 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 NEK9Q8TD19 979 aa24.5■■□□□ 1.51
TRAF4-204ENST00000422344 MTMR9Q96QG7 549 aa24.5■■□□□ 1.51
TRAF4-204ENST00000422344 ADAM2Q99965 735 aa24.5■■□□□ 1.51
TRAF4-204ENST00000422344 EIF2AK1Q9BQI3 630 aaKnown RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 SUCLA2Q9P2R7 463 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 WRAP73Q9P2S5 460 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-204ENST00000422344 IGKV6-21A0A0C4DH24 114 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 GPR37L1O60883 481 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 DGKIO75912 1065 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 SARSP49591 514 aaKnown RBP24.49■■□□□ 1.51
TRAF4-204ENST00000422344 NPEPPSP55786 919 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 DRP2Q13474 957 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 BTG3Q14201 252 aaPredicted RBP24.49■■□□□ 1.51
TRAF4-204ENST00000422344 ZNF174Q15697 407 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 LEXMQ3ZCV2 418 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 TTC38Q5R3I4 469 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 CEP89Q96ST8 783 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 GCOM2Q9BZD3 368 aaPredicted RBP24.49■■□□□ 1.51
TRAF4-204ENST00000422344 C11orf16Q9NQ32 467 aa24.49■■□□□ 1.51
TRAF4-204ENST00000422344 PI4K2BG5E9Z4 385 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 CD2BP2O95400 341 aaKnown RBP24.48■■□□□ 1.51
TRAF4-204ENST00000422344 DARSP14868 501 aaKnown RBP24.48■■□□□ 1.51
TRAF4-204ENST00000422344 RFC5P40937 340 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 TRAPPC10P48553 1259 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 EPC2Q52LR7 807 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 XKR9Q5GH70 373 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 SLC24A5Q71RS6 500 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 RHPN2Q8IUC4 686 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 TMEM192Q8IY95 271 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.48■■□□□ 1.51
TRAF4-204ENST00000422344 CCDC43Q96MW1 224 aaKnown RBP24.48■■□□□ 1.51
TRAF4-204ENST00000422344 TMEM60Q9H2L4 133 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 RGS18Q9NS28 235 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 RWDD3Q9Y3V2 267 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 PCDHB7Q9Y5E2 793 aa24.48■■□□□ 1.51
TRAF4-204ENST00000422344 TTC3P53804 2025 aa24.47■■□□□ 1.51
TRAF4-204ENST00000422344 MGEA5O60502 916 aa24.47■■□□□ 1.51
TRAF4-204ENST00000422344 SLITRK3O94933 977 aa24.47■■□□□ 1.51
TRAF4-204ENST00000422344 OR52Z1P0C646 297 aa24.47■■□□□ 1.51
TRAF4-204ENST00000422344 ZSCAN20P17040 1043 aaPredicted RBP24.47■■□□□ 1.51
TRAF4-204ENST00000422344 FAM178BQ8IXR5 827 aa24.47■■□□□ 1.51
TRAF4-204ENST00000422344 MRPL38Q96DV4 380 aaKnown RBP24.47■■□□□ 1.51
TRAF4-204ENST00000422344 ARIH1Q9Y4X5 557 aaPredicted RBP24.47■■□□□ 1.51
TRAF4-204ENST00000422344 IL9P15248 144 aa24.46■■□□□ 1.51
TRAF4-204ENST00000422344 CTNNB1P35222 781 aa24.46■■□□□ 1.51
TRAF4-204ENST00000422344 ZNF410Q86VK4 478 aa24.46■■□□□ 1.51
TRAF4-204ENST00000422344 CMTR2Q8IYT2 770 aaKnown RBP24.46■■□□□ 1.51
TRAF4-204ENST00000422344 GJD3Q8N144 294 aa24.46■■□□□ 1.51
TRAF4-204ENST00000422344 ZNF689Q96CS4 500 aaPredicted RBP24.46■■□□□ 1.51
TRAF4-204ENST00000422344 NLRP4Q96MN2 994 aa24.46■■□□□ 1.51
TRAF4-204ENST00000422344 RC3H2Q9HBD1 1191 aaKnown RBP24.46■■□□□ 1.51
TRAF4-204ENST00000422344 SMC3Q9UQE7 1217 aa24.46■■□□□ 1.51
TRAF4-204ENST00000422344 POTEMA6NI47 508 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 H3BQV1 296 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 U2AF2P26368 475 aaKnown RBP eCLIP24.45■■□□□ 1.51e-6■□□□□ 8.6
TRAF4-204ENST00000422344 GJB2P29033 226 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 HOXD11P31277 338 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 GPM6BQ13491 265 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 PTPROQ16827 1216 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 MCTP1Q6DN14 999 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 PTCRAQ6ISU1 281 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 ZNF579Q8NAF0 562 aaKnown RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 ERMNQ8TAM6 284 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 TCP11Q8WWU5 503 aa24.45■■□□□ 1.5
TRAF4-204ENST00000422344 HSD17B14Q9BPX1 270 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms