RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 DEPDC1Q5TB30 811 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 RASGRP2Q7LDG7 609 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 USHBP1Q8N6Y0 703 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 DIS3LQ8TF46 1054 aaKnown RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 VMP1Q96GC9 406 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 CCSER2Q9H7U1 834 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 TMOD3Q9NYL9 352 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 NKX1-2Q9UD57 310 aaPredicted RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 PCDHGB7Q9Y5F8 929 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 ABCC4O15439 1325 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 ARFGEF2Q9Y6D5 1785 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 F8W031 263 aaPredicted RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 CALB2P22676 271 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 RAD23BP54727 409 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 PDE1AP54750 535 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 NLRP12P59046 1061 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 CKAP4Q07065 602 aaKnown RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 PLEKHG6Q3KR16 790 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 IER5LQ5T953 404 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 MIGA2Q7L4E1 593 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 CCDC28BQ9BUN5 200 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 RNPEPL1Q9HAU8 725 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
SSB-205ENST00000422006 LRCH1Q9Y2L9 728 aa9.36□□□□□ -0.91
SSB-205ENST00000422006 ANKRD26Q9UPS8 1709 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 POTECB2RU33 542 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
SSB-205ENST00000422006 COL6A2P12110 1019 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 ETS2P15036 469 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 S100A5P33763 92 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 SPIDRQ14159 915 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 ITIH4Q14624 930 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 RASA2Q15283 850 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 BOLA3Q53S33 107 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 FAM133BQ5BKY9 247 aaKnown RBP9.35□□□□□ -0.91
SSB-205ENST00000422006 ASTLQ6HA08 431 aaPredicted RBP9.35□□□□□ -0.91
SSB-205ENST00000422006 FAM20CQ8IXL6 584 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSB-205ENST00000422006 SIX5Q8N196 739 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 SPERTQ8NA61 448 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 PPP1R14CQ8TAE6 165 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 COG3Q96JB2 828 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 PCDH12Q9NPG4 1184 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 SAMSN1Q9NSI8 373 aaKnown RBP9.35□□□□□ -0.91
SSB-205ENST00000422006 MRGBPQ9NV56 204 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSB-205ENST00000422006 SEC63Q9UGP8 760 aaKnown RBP9.35□□□□□ -0.91
SSB-205ENST00000422006 CFAP45Q9UL16 551 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
SSB-205ENST00000422006 LOC105371267A0A1B0GV96 52 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 CYTH3O43739 400 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 FOXD2O60548 495 aaPredicted RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 TJP3O95049 919 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 FDX1P10109 184 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 RARAP10276 462 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 TKTP29401 623 aaKnown RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 ACADVLP49748 655 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 GALK1P51570 392 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 RBL2Q08999 1139 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 E2F2Q14209 437 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 PKN2Q16513 984 aaKnown RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 CPLX4Q7Z7G2 160 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 TREML1Q86YW5 311 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 ANKS4BQ8N8V4 417 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 ACMSDQ8TDX5 336 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 ASAP3Q8TDY4 903 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 GTF3C2Q8WUA4 911 aaPredicted RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 USP6NLQ92738 828 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 SPOCK3Q9BQ16 436 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 TGIF2Q9GZN2 237 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 PLCB1Q9NQ66 1216 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 KIAA1257Q9ULG3 409 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 GIT1Q9Y2X7 761 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 BTBD19C9JJ37 291 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 SPECC1L-ADORA2AF8WAN1 911 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 BACH1O14867 736 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 B3GALNT1O75752 331 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 LDHCP07864 332 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
SSB-205ENST00000422006 RESTQ13127 1097 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 FKBP15Q5T1M5 1219 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 SPECC1LQ69YQ0 1117 aa9.34□□□□□ -0.91
SSB-205ENST00000422006 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms