RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 ANHXE9PGG2 379 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 NCAM2O15394 837 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
UFD1-203ENST00000421968 SNHG28P0DPA3 235 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
UFD1-203ENST00000421968 ALDH7A1P49419 539 aaKnown RBP13.78□□□□□ -0.2
UFD1-203ENST00000421968 FAM189BP81408 668 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 QRICH1Q2TAL8 776 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 STPG1Q5TH74 334 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 C12orf50Q8NA57 414 aaPredicted RBP13.78□□□□□ -0.2
UFD1-203ENST00000421968 CLDN23Q96B33 292 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 LSM14BQ9BX40 385 aaKnown RBP13.78□□□□□ -0.2
UFD1-203ENST00000421968 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 ST3GAL5Q9UNP4 418 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 NOC2LQ9Y3T9 749 aaKnown RBP13.78□□□□□ -0.2
UFD1-203ENST00000421968 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
UFD1-203ENST00000421968 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 RRN3P2A6NIE6 340 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 SPATA31C2B4DYI2 1134 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 CLCN4P51793 760 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 POLGP54098 1239 aaPredicted RBP13.77□□□□□ -0.21
UFD1-203ENST00000421968 MTAPQ13126 283 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 WTAPQ15007 396 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 SF3A2Q15428 464 aaKnown RBP13.77□□□□□ -0.21
UFD1-203ENST00000421968 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
UFD1-203ENST00000421968 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
UFD1-203ENST00000421968 RPP25Q9BUL9 199 aaKnown RBP13.77□□□□□ -0.21
UFD1-203ENST00000421968 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 RNF19AQ9NV58 838 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 DACH1Q9UI36 760 aa13.77□□□□□ -0.21
UFD1-203ENST00000421968 MYO18BQ8IUG5 2567 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 OPLAHO14841 1288 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 GPR182O15218 404 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 TOP3BO95985 862 aaKnown RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 TDGF1P13385 188 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 INSRRP14616 1297 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 RPS9P46781 194 aaKnown RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 NOVA1P51513 510 aaKnown RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 BCAR1P56945 870 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 GET4Q7L5D6 327 aaPredicted RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 LURAP1LQ8IV03 231 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 NELL2Q99435 816 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 EMILIN2Q9BXX0 1053 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
UFD1-203ENST00000421968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.76□□□□□ -0.21
UFD1-203ENST00000421968 WASF3Q9UPY6 502 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 PCDHA2Q9Y5H9 948 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
UFD1-203ENST00000421968 FIBPO43427 364 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 ORC4O43929 436 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
UFD1-203ENST00000421968 GHRHRQ02643 423 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 ZNF252P-AS1Q0IIN9 211 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 CCDC6Q16204 474 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 CYP26C1Q6V0L0 522 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 DDX53Q86TM3 631 aaKnown RBP13.75□□□□□ -0.21
UFD1-203ENST00000421968 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 NME8Q8N427 588 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 RNF169Q8NCN4 708 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 ADAM32Q8TC27 787 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 SMG7Q92540 1137 aaKnown RBP13.75□□□□□ -0.21
UFD1-203ENST00000421968 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 MAN1C1Q9NR34 630 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 MAP3K20Q9NYL2 800 aaKnown RBP13.75□□□□□ -0.21
UFD1-203ENST00000421968 RTEL1Q9NZ71 1219 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 LOC400499M0QZD8 3231 aa13.75□□□□□ -0.21
UFD1-203ENST00000421968 INPPL1O15357 1258 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 MYBP10242 640 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 TMEM173Q86WV6 379 aaPredicted RBP13.74□□□□□ -0.21
UFD1-203ENST00000421968 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
UFD1-203ENST00000421968 SMARCAD1Q9H4L7 1026 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 PIDD1Q9HB75 910 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 CDHR5Q9HBB8 845 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 F5P12259 2224 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 ASXL3Q9C0F0 2248 aa13.74□□□□□ -0.21
UFD1-203ENST00000421968 GIPC1O14908 333 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 HRO43593 1189 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 CNPP09543 421 aaKnown RBP13.73□□□□□ -0.21
UFD1-203ENST00000421968 MRPS9P82933 396 aaKnown RBP13.73□□□□□ -0.21
UFD1-203ENST00000421968 PFKPQ01813 784 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 SRSF5Q13243 272 aaKnown RBP13.73□□□□□ -0.21
UFD1-203ENST00000421968 CLLU1OSQ5K130 101 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
UFD1-203ENST00000421968 TRAPPC12Q8WVT3 735 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms