RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SREBF1P36956 1147 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 TXLNAP40222 546 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 GSK3AP49840 483 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 CCL23P55773 120 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 ARHGAP4P98171 946 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 SCRN1Q12765 414 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 BFSP2Q13515 415 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 CEP55Q53EZ4 464 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 C9orf50Q5SZB4 431 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 UTP14CQ5TAP6 766 aaKnown RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 SESTD1Q86VW0 696 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 FAM177A1Q8N128 213 aaPredicted RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 PPP1R13LQ8WUF5 828 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 SEPT1Q8WYJ6 367 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 WASF1Q92558 559 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 ACDQ96AP0 544 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 RNPC3Q96LT9 517 aaKnown RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 GPR20Q99678 358 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 C16orf70Q9BSU1 422 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 NOC4LQ9BVI4 516 aaKnown RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 C22orf23Q9BZE7 217 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 ZCCHC2Q9C0B9 1178 aaKnown RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 UPF2Q9HAU5 1272 aaKnown RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 KCNH7Q9NS40 1196 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 HDAC6Q9UBN7 1215 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 ZNF215Q9UL58 517 aaPredicted RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 ATXN7L1Q9ULK2 861 aaPredicted RBP8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 KIAA1217Q5T5P2 1943 aa8.6□□□□□ -1.03
AC012560.1-202ENST00000421324 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 LGALS2P05162 132 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 CYP3A4P08684 503 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 GNAT1P11488 350 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 KCNA2P16389 499 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 EPHB4P54760 987 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 PTK7Q13308 1070 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 TBCELQ5QJ74 424 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 GALNT17Q6IS24 598 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 GDF6Q6KF10 455 aaPredicted RBP8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 PSRC1Q6PGN9 363 aaPredicted RBP8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 ZNF365Q70YC5 407 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 NIPA1Q7RTP0 329 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 PLA2G4DQ86XP0 818 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 CYP2W1Q8TAV3 490 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 GLG1Q92896 1179 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 TNPO1Q92973 898 aaKnown RBP8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 ABHD17AQ96GS6 310 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 MTIF3Q9H2K0 278 aaKnown RBP8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 JPH1Q9HDC5 661 aaPredicted RBP8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 IL23AQ9NPF7 189 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 SLC9A2Q9UBY0 812 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.03
AC012560.1-202ENST00000421324 NFASCO94856 1347 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 C17orf102A2RUQ5 167 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 EML1O00423 815 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 SOX1O00570 391 aaPredicted RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 C2CD2LO14523 706 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 ARP10275 920 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 ACRP10323 421 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 RFC2P35250 354 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 TCF7P36402 384 aaPredicted RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 USP11P51784 963 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 ME3Q16798 604 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 C8orf34Q49A92 452 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 CRTC2Q53ET0 693 aaPredicted RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 TMEM240Q5SV17 173 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 SH3PXD2AQ5TCZ1 1133 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 C16orf59Q7L2K0 433 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 BLIDQ8IZY5 108 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 NECAB1Q8N987 351 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 CAGE1Q8TC20 777 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 RASGRP4Q8TDF6 673 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 SCLYQ96I15 445 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 FTOQ9C0B1 505 aaKnown RBP eCLIP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 SMARCAD1Q9H4L7 1026 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 AZI2Q9H6S1 392 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 AGO4Q9HCK5 861 aaKnown RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 TBC1D22BQ9NU19 505 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 ORC3Q9UBD5 711 aaPredicted RBP8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 TCEAL9Q9UHQ7 104 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 LIMCH1Q9UPQ0 1083 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 PCDHGC4Q9Y5F7 938 aa8.58□□□□□ -1.04
AC012560.1-202ENST00000421324 UMODL1Q5DID0 1318 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 STK36Q9NRP7 1315 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 MYH7BA7E2Y1 1941 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 GSTTP1A0A1W2PQM5 241 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 FAM86B1E9PN63 330 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 IPO5O00410 1097 aaKnown RBP8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 ADAMTS3O15072 1205 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 PARNO95453 639 aaKnown RBP8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 PFKMP08237 780 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 FAM86B2P0C5J1 330 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 IQCF3P0C7M6 154 aa8.57□□□□□ -1.04
AC012560.1-202ENST00000421324 SMIM10L2AP0DMW4 78 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms