RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 DMAC2Q9NW81 257 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 WDR81Q562E7 1941 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 TTC26A0AVF1 554 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 STX10O60499 249 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 TM4SF4P48230 202 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 CASP4P49662 377 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 ALCAMQ13740 583 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 CNGA4Q8IV77 575 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 GBP3Q9H0R5 595 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 CREBZFQ9NS37 354 aa23.04■■□□□ 1.28
GPC1-202ENST00000420138 DIS3Q9Y2L1 958 aaKnown RBP23.04■■□□□ 1.28
GPC1-202ENST00000420138 DEFB115Q30KQ5 88 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 MTERF2Q49AM1 385 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 FKBP15Q5T1M5 1219 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 MAMDC4Q6UXC1 1216 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 HAUS6Q7Z4H7 955 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 FRMD5Q7Z6J6 570 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 PLEKHH3Q7Z736 793 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 BORCS6Q96GS4 357 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 NTPCRQ9BSD7 190 aaKnown RBP23.03■■□□□ 1.28
GPC1-202ENST00000420138 ZFYVE28Q9HCC9 887 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 SLC16A3O15427 465 aaKnown RBP23.03■■□□□ 1.28
GPC1-202ENST00000420138 TLR2O60603 784 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 LGR5O75473 907 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 TXNP10599 105 aaKnown RBP23.03■■□□□ 1.28
GPC1-202ENST00000420138 RPL13P26373 211 aaKnown RBP23.03■■□□□ 1.28
GPC1-202ENST00000420138 MAPK4P31152 587 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 NPTX2P47972 431 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 STAT5BP51692 787 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 APLP1P51693 650 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 NOGQ13253 232 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 TARBP2Q15633 366 aaKnown RBP23.03■■□□□ 1.28
GPC1-202ENST00000420138 CCAR2Q8N163 923 aaKnown RBP23.03■■□□□ 1.28
GPC1-202ENST00000420138 CCDC155Q8N6L0 562 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 MCPH1Q8NEM0 835 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 MYRIPQ8NFW9 859 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 KIFAP3Q92845 792 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 CCDC51Q96ER9 411 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 ABHD10Q9NUJ1 306 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 CAPN11Q9UMQ6 739 aa23.03■■□□□ 1.28
GPC1-202ENST00000420138 RBM47A0AV96 593 aaKnown RBP23.02■■□□□ 1.28
GPC1-202ENST00000420138 SLC16A4O15374 487 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 ARHGAP6O43182 974 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 SNAI1O95863 264 aaPredicted RBP23.02■■□□□ 1.28
GPC1-202ENST00000420138 RTP1P59025 263 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 TTLL4Q14679 1199 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 FIGNQ5HY92 759 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 TMEM161BQ8NDZ6 487 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 SCFD2Q8WU76 684 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 SPIRE2Q8WWL2 714 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 DHX33Q9H6R0 707 aaKnown RBP23.02■■□□□ 1.28
GPC1-202ENST00000420138 C17orf75Q9HAS0 396 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 ATP6V0A4Q9HBG4 840 aa23.02■■□□□ 1.28
GPC1-202ENST00000420138 ZNF236Q9UL36 1845 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 KCNMA1Q12791 1236 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 DHX37Q8IY37 1157 aaKnown RBP23.01■■□□□ 1.27
GPC1-202ENST00000420138 RETREG2Q8NC44 543 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 TMEM174Q8WUU8 243 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 MAML3Q96JK9 1138 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 CAPNS2Q96L46 248 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 C16orf45Q96MC5 204 aaPredicted RBP23.01■■□□□ 1.27
GPC1-202ENST00000420138 VTA1Q9NP79 307 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.01■■□□□ 1.27
GPC1-202ENST00000420138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.01■■□□□ 1.27
GPC1-202ENST00000420138 ARID2Q68CP9 1835 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 KRT9P35527 623 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 CRHR2Q13324 411 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 FAM160B1Q5W0V3 765 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 HS2ST1Q7LGA3 356 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 SLC9A9Q8IVB4 645 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 SPATA33Q96N06 139 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 KIFC3Q9BVG8 833 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 NUP58Q9BVL2 599 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 TMEM206Q9H813 350 aa23.01■■□□□ 1.27
GPC1-202ENST00000420138 ARMCX3Q9UH62 379 aaPredicted RBP23.01■■□□□ 1.27
GPC1-202ENST00000420138 MGAMO43451 1857 aa23■■□□□ 1.27
GPC1-202ENST00000420138 DOCK3Q8IZD9 2030 aa23■■□□□ 1.27
GPC1-202ENST00000420138 EPHB6O15197 1021 aa23■■□□□ 1.27
GPC1-202ENST00000420138 TPM1P09493 284 aa23■■□□□ 1.27
GPC1-202ENST00000420138 TNNT1P13805 278 aa23■■□□□ 1.27
GPC1-202ENST00000420138 EMC2Q15006 297 aa23■■□□□ 1.27
GPC1-202ENST00000420138 C17orf99Q6UX52 265 aa23■■□□□ 1.27
GPC1-202ENST00000420138 DPP9Q86TI2 863 aa23■■□□□ 1.27
GPC1-202ENST00000420138 TRIM50Q86XT4 487 aa23■■□□□ 1.27
GPC1-202ENST00000420138 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
GPC1-202ENST00000420138 NPLOC4Q8TAT6 608 aa23■■□□□ 1.27
GPC1-202ENST00000420138 GOLGA5Q8TBA6 731 aa23■■□□□ 1.27
GPC1-202ENST00000420138 ACCSQ96QU6 501 aa23■■□□□ 1.27
GPC1-202ENST00000420138 AGPAT5Q9NUQ2 364 aa23■■□□□ 1.27
GPC1-202ENST00000420138 FAM184BQ9ULE4 1060 aa23■■□□□ 1.27
GPC1-202ENST00000420138 ADGRA3Q8IWK6 1321 aa23■■□□□ 1.27
GPC1-202ENST00000420138 SLC15A5A6NIM6 579 aa22.99■■□□□ 1.27
GPC1-202ENST00000420138 TISP43B9A030 160 aa22.99■■□□□ 1.27
GPC1-202ENST00000420138 ARHGAP1Q07960 439 aa22.99■■□□□ 1.27
GPC1-202ENST00000420138 DMP1Q13316 513 aaPredicted RBP22.99■■□□□ 1.27
GPC1-202ENST00000420138 DNAJC7Q99615 494 aa22.99■■□□□ 1.27
GPC1-202ENST00000420138 MKNK1Q9BUB5 465 aa22.99■■□□□ 1.27
GPC1-202ENST00000420138 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
GPC1-202ENST00000420138 AOC2O75106 756 aa22.98■■□□□ 1.27
GPC1-202ENST00000420138 KCNH2Q12809 1159 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms