RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 PURBQ96QR8 312 aaKnown RBP12.62□□□□□ -0.39
DDR1-232ENST00000418800 LRRC27Q9C0I9 530 aa12.62□□□□□ -0.39
DDR1-232ENST00000418800 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
DDR1-232ENST00000418800 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
DDR1-232ENST00000418800 PPFIA2O75334 1257 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ZCCHC18P0CG32 403 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 COPS2P61201 443 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 C18orf8Q96DM3 657 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 HAO1Q9UJM8 370 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 NAGPAQ9UK23 515 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 UBTFL6P0CB48 400 aaPredicted RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 SERPINB4P48594 390 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 USP11P51784 963 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 TLDC1Q6P9B6 456 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 GSTA5Q7RTV2 222 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 SCYL3Q8IZE3 742 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 P3H4Q92791 437 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ELMO3Q96BJ8 720 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ZNF512BQ96KM6 892 aaPredicted RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 BAG2O95816 211 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 CASP4P49662 377 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 RPS8P62241 208 aaKnown RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 BYSLQ13895 437 aaKnown RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 HGSNATQ68CP4 663 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 TXNRD3Q86VQ6 643 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 SLC35G2Q8TBE7 412 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 PIGOQ8TEQ8 1089 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 MAD2L2Q9UI95 211 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 SCOCQ9UIL1 159 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 MINPP1Q9UNW1 487 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 MYH2Q9UKX2 1941 aa12.61□□□□□ -0.39
DDR1-232ENST00000418800 ATXN2Q99700 1313 aaKnown RBP12.61□□□□□ -0.39
DDR1-232ENST00000418800 A0A1B0GVG6 124 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 TMEM120BA0PK00 339 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 POC1B-GALNT4F8VUJ3 575 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 NCALDP61601 193 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 UBXN2AP68543 259 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 KLC1Q07866 573 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 ERMARDQ5T6L9 678 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 AGBL2Q5U5Z8 902 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 SPATA21Q7Z572 469 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 ABTB1Q969K4 478 aaPredicted RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 CYTH2Q99418 400 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 PCIF1Q9H4Z3 704 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 PFDN1O60925 122 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 FAM13AO94988 1023 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 RCAN1P53805 252 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 SFR1Q86XK3 245 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 TPH2Q8IWU9 490 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 SYCE1Q8N0S2 351 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 STMN2Q93045 179 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 FGD4Q96M96 766 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 DDX50Q9BQ39 737 aaKnown RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 PITPNM3Q9BZ71 974 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 TMEM165Q9HC07 324 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 RHBDL2Q9NX52 303 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 ZMYND8Q9ULU4 1186 aaPredicted RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 C6orf229H3BNL8 230 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 SPAG7O75391 227 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
DDR1-232ENST00000418800 CREB1P16220 341 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 ITIH3Q06033 890 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 FIGNQ5HY92 759 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 TTBK2Q6IQ55 1244 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 TPCN2Q8NHX9 752 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 MCUR1Q96AQ8 359 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 IQCDQ96DY2 449 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 MMTAG2Q9BU76 263 aaKnown RBP12.6□□□□□ -0.39
DDR1-232ENST00000418800 PPP1R9AQ9ULJ8 1098 aa12.6□□□□□ -0.39
DDR1-232ENST00000418800 LAD1O00515 517 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
DDR1-232ENST00000418800 BRAFP15056 766 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 KRT15P19012 456 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 YY1P25490 414 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 SLMAPQ14BN4 828 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 CD302Q8IX05 232 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 VPS52Q8N1B4 723 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 PPFIBP2Q8ND30 876 aa12.59□□□□□ -0.39
DDR1-232ENST00000418800 PNMA5Q96PV4 448 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms