RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CYP4A11Q02928 519 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 RESTQ13127 1097 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 CTTNQ14247 550 aaKnown RBP11.77□□□□□ -0.53
RFC1-203ENST00000418436 IL17AQ16552 155 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 TCTN1Q2MV58 587 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 IER5Q5VY09 327 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 CNKSR3Q6P9H4 555 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 FERMT3Q86UX7 667 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 IGSF22Q8N9C0 903 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 POLR3CQ9BUI4 534 aaPredicted RBP11.77□□□□□ -0.53
RFC1-203ENST00000418436 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
RFC1-203ENST00000418436 CXXC1Q9P0U4 656 aaPredicted RBP11.77□□□□□ -0.53
RFC1-203ENST00000418436 PPME1Q9Y570 386 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 SQORQ9Y6N5 450 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 MICAL3Q7RTP6 2002 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 LAMA3Q16787 3333 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 ZBTB39O15060 712 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
RFC1-203ENST00000418436 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 XRCC6P12956 609 aaKnown RBP eCLIP11.76□□□□□ -0.53
RFC1-203ENST00000418436 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
RFC1-203ENST00000418436 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
RFC1-203ENST00000418436 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 LPIN1Q14693 890 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 TMEM266Q2M3C6 531 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 FBXO47Q5MNV8 452 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 SMYD5Q6GMV2 418 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 EFCAB12Q6NXP0 572 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 OTUD6AQ7L8S5 288 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 DBF4BQ8NFT6 615 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 SH2D3AQ9BRG2 576 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 CELF4Q9BZC1 486 aaKnown RBP11.76□□□□□ -0.53
RFC1-203ENST00000418436 MTIF3Q9H2K0 278 aaKnown RBP11.76□□□□□ -0.53
RFC1-203ENST00000418436 TUFT1Q9NNX1 390 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 CYP26B1Q9NR63 512 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 TRPV2Q9Y5S1 764 aa11.76□□□□□ -0.53
RFC1-203ENST00000418436 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 RBAK-RBAKDNI3L0D1 243 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 GPR32O75388 356 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 MED24O75448 989 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 MUTP22033 750 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 RPA1P27694 616 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 NPEPPSP55786 919 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 TMEM62Q0P6H9 643 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 ARL6IP4Q66PJ3 421 aaKnown RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 PLA2G4FQ68DD2 849 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 DTHD1Q6ZMT9 781 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 METTL13Q8N6R0 699 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 ERMNQ8TAM6 284 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 ZSCAN16Q9H4T2 348 aaPredicted RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 DHX33Q9H6R0 707 aaKnown RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 ANKEF1Q9NU02 776 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 LRWD1Q9UFC0 647 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 SLC4A7Q9Y6M7 1214 aa11.75□□□□□ -0.53
RFC1-203ENST00000418436 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
RFC1-203ENST00000418436 M0QZ92 97 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 EFCAB14O75071 495 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 BMP15O95972 392 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 TMOD1P28289 359 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 RFC5P40937 340 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 CLCN3P51790 818 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 WDR5P61964 334 aaKnown RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 DRP2Q13474 957 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 IKBKEQ14164 716 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 TSHZ1Q6ZSZ6 1077 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 FAM43BQ6ZT52 329 aaPredicted RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 EXOC8Q8IYI6 725 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 LRRC71Q8N4P6 559 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 PHOSPHO2Q8TCD6 241 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 SEPT8Q92599 483 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 APBB2Q92870 758 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 JPH2Q9BR39 696 aaPredicted RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 IFIH1Q9BYX4 1025 aaKnown RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 RAB34Q9BZG1 259 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 ADAMTS10Q9H324 1103 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 AGO3Q9H9G7 860 aaKnown RBP11.74□□□□□ -0.53
RFC1-203ENST00000418436 SUGCTQ9HAC7 445 aa11.74□□□□□ -0.53
RFC1-203ENST00000418436 ZBBXA8MT70 800 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 VTNP04004 478 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 GHRP10912 638 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 RARRES1P49788 294 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 GPC3P51654 580 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 PTPAQ15257 358 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 SF3A1Q15459 793 aaKnown RBP11.73□□□□□ -0.53
RFC1-203ENST00000418436 ECM1Q16610 540 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 XKR9Q5GH70 373 aa11.73□□□□□ -0.53
RFC1-203ENST00000418436 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms