RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 ERICH1Q86X53 443 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 ENGASEQ8NFI3 743 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 FAM71BQ8TC56 605 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 P3H4Q92791 437 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 ZWILCHQ9H900 591 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 WDR70Q9NW82 654 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 PNMA3Q9UL41 463 aa14.24□□□□□ -0.13
BDNF-208ENST00000418212 I3L4J1 428 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 SLC20A2Q08357 652 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 EXOC8Q8IYI6 725 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 ATP2A3Q93084 1043 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 EXOC4Q96A65 974 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 ZMYND12Q9H0C1 365 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
BDNF-208ENST00000418212 ZNF302Q9NR11 478 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 MKRN1Q9UHC7 482 aaKnown RBP14.23□□□□□ -0.13
BDNF-208ENST00000418212 CCDC160A6NGH7 325 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 MAGEA9P43362 315 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 NPEPPSP55786 919 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 SARNPP82979 210 aaKnown RBP14.23□□□□□ -0.13
BDNF-208ENST00000418212 DPYDQ12882 1025 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 ZC2HC1CQ53FD0 456 aaPredicted RBP14.23□□□□□ -0.13
BDNF-208ENST00000418212 C10orf76Q5T2E6 689 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 VPS52Q8N1B4 723 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 STMN2Q93045 179 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 REEP2Q9BRK0 252 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 TUBE1Q9UJT0 475 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 PREX1Q8TCU6 1659 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 PPFIA4O75335 1185 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 ACTN1P12814 892 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 BBS9Q3SYG4 887 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 RSPH3Q86UC2 560 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 CACNA2D3Q8IZS8 1091 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 FAM151AQ8WW52 585 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 CCT6BQ92526 530 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 INTS9Q9NV88 658 aaKnown RBP14.23□□□□□ -0.13
BDNF-208ENST00000418212 INPP5FQ9Y2H2 1132 aa14.23□□□□□ -0.13
BDNF-208ENST00000418212 EIF3CLB5ME19 914 aaKnown RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 ACSL3O95573 720 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 GMPSP49915 693 aaPredicted RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 PPP4CP60510 307 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 ALCAMQ13740 583 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 NEDD9Q14511 834 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 EPHA7Q15375 998 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 C4orf50Q6ZRC1 276 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 EIF3CQ99613 913 aaKnown RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 TEX13BQ9BXU2 312 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 SLC38A10Q9HBR0 1119 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 AFG3L2Q9Y4W6 797 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 ENTPD3O75355 529 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 EYA4O95677 639 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 FTLP02792 175 aaPredicted RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 NR3C2P08235 984 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 KCNB1Q14721 858 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 TWF2Q6IBS0 349 aaKnown RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 APOBEC3FQ8IUX4 373 aaKnown RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 DCLK2Q8N568 766 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 TMEM143Q96AN5 459 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 FMO2Q99518 471 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 MYO1EQ12965 1108 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 PLA2G4FQ68DD2 849 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 SLC30A10Q6XR72 485 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 RNF149Q8NC42 400 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 POLR3FQ9H1D9 316 aaPredicted RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 PFDN4Q9NQP4 134 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 ZRANB2O95218 330 aaKnown RBP eCLIP14.22□□□□□ -0.13
BDNF-208ENST00000418212 ACOT2P49753 483 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 PDE1BQ01064 536 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 SLC15A2Q16348 729 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 RPUSD2Q8IZ73 545 aaKnown RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 KCTD6Q8NC69 237 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 RNF25Q96BH1 459 aaPredicted RBP14.22□□□□□ -0.13
BDNF-208ENST00000418212 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 PCSK1NQ9UHG2 260 aa14.22□□□□□ -0.13
BDNF-208ENST00000418212 GOLGA8KD6RF30 607 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 YWHABP31946 246 aaKnown RBP14.21□□□□□ -0.13
BDNF-208ENST00000418212 PHBP35232 272 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 C2orf69Q8N8R5 385 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 DNAAF3Q8N9W5 541 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 SPATA33Q96N06 139 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 FAM114A2Q9NRY5 505 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 RWDD2BP57060 319 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 DR1Q01658 176 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 CCDC62Q6P9F0 684 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 RPAINQ86UA6 219 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 ATG4CQ96DT6 458 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 PBKQ96KB5 322 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 TACO1Q9BSH4 297 aaKnown RBP14.21□□□□□ -0.13
BDNF-208ENST00000418212 SMYD2Q9NRG4 433 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 TTC7AQ9ULT0 858 aaPredicted RBP14.21□□□□□ -0.13
BDNF-208ENST00000418212 TFR2Q9UP52 801 aa14.21□□□□□ -0.13
BDNF-208ENST00000418212 MST1RQ04912 1400 aa14.21□□□□□ -0.14
BDNF-208ENST00000418212 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.14
BDNF-208ENST00000418212 SLC4A1P02730 911 aa14.21□□□□□ -0.14
BDNF-208ENST00000418212 SFNP31947 248 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms