RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 FAM217BQ9NTX9 383 aaPredicted RBP24.38■■□□□ 1.49
RHBDD3-204ENST00000414672 HOXB8P17481 243 aaPredicted RBP24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 ADD1P35611 737 aaKnown RBP24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 VCPP55072 806 aaKnown RBP24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 KCNC3Q14003 757 aa24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 ECHDC2Q86YB7 292 aa24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 REXO1Q8N1G1 1221 aaKnown RBP24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 LRRC71Q8N4P6 559 aa24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 CRYGNQ8WXF5 182 aa24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 EVPLQ92817 2033 aa24.37■■□□□ 1.49
RHBDD3-204ENST00000414672 CCDC196A0A1B0GTZ2 297 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 EIF4BP23588 611 aaKnown RBP24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 AVPR2P30518 371 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 METAP2P50579 478 aaKnown RBP eCLIP24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 ADCK5Q3MIX3 580 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 TPRNQ4KMQ1 711 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 CCDC12Q8WUD4 166 aaPredicted RBP24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 CASP10Q92851 521 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 ADAMTS10Q9H324 1103 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 NRBP2Q9NSY0 501 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 RNF19AQ9NV58 838 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 FAM86C1Q9NVL1 165 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 NR2E1Q9Y466 385 aa24.36■■□□□ 1.49
RHBDD3-204ENST00000414672 SMC1AQ14683 1233 aaKnown RBP24.35■■□□□ 1.49
RHBDD3-204ENST00000414672 CES5AQ6NT32 575 aa24.35■■□□□ 1.49
RHBDD3-204ENST00000414672 RASEFQ8IZ41 740 aa24.35■■□□□ 1.49
RHBDD3-204ENST00000414672 ATOH1Q92858 354 aaPredicted RBP24.35■■□□□ 1.49
RHBDD3-204ENST00000414672 ZMYND12Q9H0C1 365 aa24.35■■□□□ 1.49
RHBDD3-204ENST00000414672 WDR64B1ANS9 1081 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 ADAMTS3O15072 1205 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 KRT32Q14532 448 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 ZNF710Q8N1W2 664 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 TMEM87AQ8NBN3 555 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 HELQQ8TDG4 1101 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 IRF2BPLQ9H1B7 796 aa24.34■■□□□ 1.49
RHBDD3-204ENST00000414672 ESYT2A0FGR8 921 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 ST18O60284 1047 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 OATP04181 439 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 FGFR4P22455 802 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 GNA11P29992 359 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 RCAN1P53805 252 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 BMS1Q14692 1282 aaKnown RBP24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 CLLU1OSQ5K130 101 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 MRPL43Q8N983 215 aaKnown RBP24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 KREMEN2Q8NCW0 462 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 NLRP7Q8WX94 980 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 DISC1Q9NRI5 854 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 CDH22Q9UJ99 828 aa24.33■■□□□ 1.49
RHBDD3-204ENST00000414672 C2orf71A6NGG8 1288 aa24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 HMGB1P09429 215 aaKnown RBP24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 DARSP14868 501 aaKnown RBP24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 ALDH7A1P49419 539 aaKnown RBP24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 AKAP17AQ02040 695 aaKnown RBP24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 TSGA10IPQ3SY00 556 aa24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 SLC39A11Q8N1S5 342 aa24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 LINC01465Q8N7H1 131 aa24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 RIPOR3Q96MK2 946 aa24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 HCFC2Q9Y5Z7 792 aa24.32■■□□□ 1.48
RHBDD3-204ENST00000414672 A0A0U1RQF3 1178 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 NT5C1B-RDH14C9J2C7 533 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 CHMP2AO43633 222 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 CXCL14O95715 111 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 EOMESO95936 686 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 PDGFBP01127 241 aaPredicted RBP24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 GPC3P51654 580 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 PRKCEQ02156 737 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 ITIH3Q06033 890 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 TBC1D8BQ0IIM8 1120 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 BICD2Q8TD16 824 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 NECTIN4Q96NY8 510 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 MRPL9Q9BYD2 267 aaKnown RBP24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 ADAM7Q9H2U9 754 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 DACT1Q9NYF0 836 aa24.31■■□□□ 1.48
RHBDD3-204ENST00000414672 ZNF862O60290 1169 aa24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 GFRA3O60609 400 aa24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 CLASP2O75122 1294 aaKnown RBP24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 CIITAP33076 1130 aa24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 MTMR3Q13615 1198 aa24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 TMEM169Q96HH4 297 aa24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 POMKQ9H5K3 350 aa24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 ZFHX2Q9C0A1 2572 aaPredicted RBP24.3■■□□□ 1.48
RHBDD3-204ENST00000414672 C2CD4DB7Z1M9 353 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 H0Y858 1186 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 PRPF3O43395 683 aaKnown RBP24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 GAS7O60861 476 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 CSDE1O75534 798 aaKnown RBP24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 CPA1P15085 419 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 BCAR1P56945 870 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 BMP2KLQ5H9B9 411 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 UBALD2Q8IYN6 164 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 PHKBQ93100 1093 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 CCDC136Q96JN2 1154 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 SORCS3Q9UPU3 1222 aa24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 MYH9P35579 1960 aaKnown RBP24.29■■□□□ 1.48
RHBDD3-204ENST00000414672 MSH4O15457 936 aa24.28■■□□□ 1.48
RHBDD3-204ENST00000414672 WEE2P0C1S8 567 aa24.28■■□□□ 1.48
RHBDD3-204ENST00000414672 MTHFRP42898 656 aa24.28■■□□□ 1.48
RHBDD3-204ENST00000414672 UGCGQ16739 394 aa24.28■■□□□ 1.48
RHBDD3-204ENST00000414672 RARS2Q5T160 578 aaKnown RBP24.28■■□□□ 1.48
RHBDD3-204ENST00000414672 Q6ZUG5 572 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms