RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	LRRC71	Q8N4P6	559 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	FSIP1	Q8NA03	581 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	ENGASE	Q8NFI3	743 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	IPO4	Q8TEX9	1081 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	DNAJB3	Q8WWF6	145 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	MRPS27	Q92552	414 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	LARP4B	Q92615	738 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	MTR	Q99707	1265 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	RYDEN	Q9NUL5	291 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	FAM13B	Q9NYF5	915 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	CEP290	O15078	2479 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	RBAK-RBAKDN	I3L0D1	243 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	ACTN4	O43707	911 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	USO1	O60763	962 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	DGAT1	O75907	488 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	CKB	P12277	381 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	CYP11B2	P19099	503 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	ITGB8	P26012	769 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	STAT6	P42226	847 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	POLG	P54098	1239 aa	Predicted RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	SNW1	Q13573	536 aa	Known RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	CSPP1	Q1MSJ5	1256 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	C7orf61	Q8IZ16	206 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	METTL13	Q8N6R0	699 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	SLC7A3	Q8WY07	619 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	DHX58	Q96C10	678 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	ATP6V0A4	Q9HBG4	840 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	TMEM39A	Q9NV64	488 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	KBTBD4	Q9NVX7	518 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	PCDH10	Q9P2E7	1040 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	UMODL1	Q5DID0	1318 aa		11.43	□□□□□ -0.58
ZNF3-205	ENST00000413658	GAS2	O43903	313 aa	Known RBP	11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	EVI5	O60447	810 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	GPR32	O75388	356 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	PRPF40A	O75400	957 aa	Known RBP	11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	CHRNA1	P02708	482 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	VTN	P04004	478 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	LIG1	P18858	919 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	GUCY2C	P25092	1073 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	ARL2	P36404	184 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	MGAT3	Q09327	533 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	MAPK7	Q13164	816 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	GPNMB	Q14956	572 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	LONRF3	Q496Y0	759 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	TPRN	Q4KMQ1	711 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	FAM26D	Q5JW98	314 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	GPBP1	Q86WP2	473 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	EXOC8	Q8IYI6	725 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	DAW1	Q8N136	415 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	IQUB	Q8NA54	791 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	RETREG2	Q8NC44	543 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	RASSF8	Q8NHQ8	419 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	CAGE1	Q8TC20	777 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	TMEM143	Q96AN5	459 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	JPH2	Q9BR39	696 aa	Predicted RBP	11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	OSBPL7	Q9BZF2	842 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	WNT8A	Q9H1J5	351 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	ADAMTS10	Q9H324	1103 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	HIPK3	Q9H422	1215 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	CUEDC2	Q9H467	287 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	SUGCT	Q9HAC7	445 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	GPRC5C	Q9NQ84	441 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	LMBRD1	Q9NUN5	540 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	NOD1	Q9Y239	953 aa		11.42	□□□□□ -0.58
ZNF3-205	ENST00000413658	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	MYMK	A6NI61	221 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	CAND2	O75155	1236 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	TIMP1	P01033	207 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	SLFN14	P0C7P3	912 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	CYP2C18	P33260	490 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	THPO	P40225	353 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	SYK	P43405	635 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	RANBP2	P49792	3224 aa	Known RBP	11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	UBE2H	P62256	183 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	MRPS6	P82932	125 aa	Known RBP	11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	MBTPS1	Q14703	1052 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	ZNF618	Q5T7W0	954 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	IER5	Q5VY09	327 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	NME8	Q8N427	588 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	EFCAB3	Q8N7B9	438 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	MCPH1	Q8NEM0	835 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	ASAP3	Q8TDY4	903 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	PRPF31	Q8WWY3	499 aa	Known RBP	11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	DNAJC19	Q96DA6	116 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	VWCE	Q96DN2	955 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	CCDC43	Q96MW1	224 aa	Known RBP	11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	GBP4	Q96PP9	640 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	CDHR5	Q9HBB8	845 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	KCND2	Q9NZV8	630 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	SERTAD1	Q9UHV2	236 aa		11.41	□□□□□ -0.58
ZNF3-205	ENST00000413658	GOLGA6L4	A6NEF3	574 aa		11.4	□□□□□ -0.58
ZNF3-205	ENST00000413658	HIP1R	O75146	1068 aa		11.4	□□□□□ -0.58
ZNF3-205	ENST00000413658	NR1I2	O75469	434 aa		11.4	□□□□□ -0.58
ZNF3-205	ENST00000413658	ZNF202	O95125	648 aa		11.4	□□□□□ -0.58
ZNF3-205	ENST00000413658	SSB	P05455	408 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
ZNF3-205	ENST00000413658	SELP	P16109	830 aa		11.4	□□□□□ -0.58
ZNF3-205	ENST00000413658	TMOD1	P28289	359 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms