RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 ZNF658Q5TYW1 1059 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 ISM2Q6H9L7 571 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 MTHFD1LQ6UB35 978 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 MAEAQ7L5Y9 396 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 SESTD1Q86VW0 696 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 CCDC65Q8IXS2 484 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 LRRC71Q8N4P6 559 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 ASAP3Q8TDY4 903 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 SLC7A3Q8WY07 619 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 DRC1Q96MC2 740 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 SETD4Q9NVD3 440 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 RMND1Q9NWS8 449 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 HDAC6Q9UBN7 1215 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 GTF2IRD1Q9UHL9 959 aa11.7□□□□□ -0.54
SMARCAL1-204ENST00000412913 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 DNM1LO00429 736 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 PLS3P13797 630 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 GAP43P17677 238 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 GLRA2P23416 452 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 CLCN3P51790 818 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 NCKAP1LP55160 1127 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 NBPF20Q3BBV1 942 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 FAM102BQ5T8I3 360 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 SASS6Q6UVJ0 657 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 SLC43A3Q8NBI5 491 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 KIFAP3Q92845 792 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 MED15Q96RN5 788 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 STRA6Q9BX79 667 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 MCOLN1Q9GZU1 580 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 PARVGQ9HBI0 331 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 SEL1LQ9UBV2 794 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
SMARCAL1-204ENST00000412913 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 KBTBD13C9JR72 458 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 CABYRO75952 493 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 GJB1P08034 283 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 MYBP10242 640 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 KLRC1P26715 233 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 PSMD2Q13200 908 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 CAPSQ13938 189 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 HERC4Q5GLZ8 1057 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 RUFY4Q6ZNE9 571 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 ARRDC4Q8NCT1 418 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 KCNN1Q92952 543 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 KIFC3Q9BVG8 833 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 DNAJC25Q9H1X3 360 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 TBC1D7Q9P0N9 293 aa11.68□□□□□ -0.54
SMARCAL1-204ENST00000412913 SMIM35A0A1B0GVV1 85 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 C17orf102A2RUQ5 167 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 K7ENM7 598 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 MAGEB2O15479 319 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 TREHO43280 583 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 SGPL1O95470 568 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 NMT1P30419 496 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 HOXD13P35453 343 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 PRCPP42785 496 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 NAMPTP43490 491 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 NPTX2P47972 431 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 GJA8P48165 433 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 PEX3P56589 373 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 BMT2Q1RMZ1 405 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 ODR4Q5SWX8 454 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 IER5Q5VY09 327 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 CDCA2Q69YH5 1023 aaPredicted RBP11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 TAS1R3Q7RTX0 852 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 ADSSL1Q8N142 457 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 MYCT1Q8N699 235 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 SCFD1Q8WVM8 642 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 TCP11Q8WWU5 503 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 WNT8BQ93098 351 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 TSPY26PQ9H489 355 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 ST6GALNAC4Q9H4F1 302 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 C17orf75Q9HAS0 396 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 LARSQ9P2J5 1176 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 ARHGAP28Q9P2N2 729 aa11.67□□□□□ -0.54
SMARCAL1-204ENST00000412913 UBE4BO95155 1302 aa11.66□□□□□ -0.54
SMARCAL1-204ENST00000412913 EIF3DO15371 548 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMARCAL1-204ENST00000412913 SLC16A4O15374 487 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms