RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 H0YCG3 227 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 CETN3O15182 167 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 GNA14O95837 355 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 PRKCSHP14314 528 aaPredicted RBP12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 ATP4AP20648 1035 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 RPL13P26373 211 aaKnown RBP12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 MARK3P27448 753 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 ABCD1P33897 745 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 PEX3P56589 373 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 KIF22Q14807 665 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 EMC2Q15006 297 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 DUSP28Q4G0W2 176 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 ZNF720Q7Z2F6 126 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 VSTM4Q8IW00 320 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 EXOC8Q8IYI6 725 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 SYCP3Q8IZU3 236 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 PPTC7Q8NI37 304 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 GOLGA5Q8TBA6 731 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 ATP8B4Q8TF62 1192 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 SLC7A3Q8WY07 619 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 USP6NLQ92738 828 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 HVCN1Q96D96 273 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 VPS16Q9H269 839 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 GPRC5CQ9NQ84 441 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 TRAF3IP3Q9Y228 551 aa12.79□□□□□ -0.36
SNRNP35-202ENST00000412157 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 CCDC169A6NNP5 214 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 NRDCO43847 1150 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 GAS2O43903 313 aaKnown RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 HBP1O60381 514 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 PTGS1P23219 599 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 PSMC4P43686 418 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 RTP1P59025 263 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 TNFAIP2Q03169 654 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 TBC1D8BQ0IIM8 1120 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 NR1I3Q14994 352 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 PPP2R5AQ15172 486 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 CCDC144BQ3MJ40 725 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 ZC2HC1CQ53FD0 456 aaPredicted RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 GJC2Q5T442 439 aaPredicted RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 LRRC55Q6ZSA7 311 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 APTXQ7Z2E3 356 aaKnown RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 FIZ1Q96SL8 496 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 JPH2Q9BR39 696 aaPredicted RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 TUBGCP2Q9BSJ2 902 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 ST6GALNAC4Q9H4F1 302 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 DHX33Q9H6R0 707 aaKnown RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 TMEM206Q9H813 350 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 KMT5AQ9NQR1 393 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 ERAP1Q9NZ08 941 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 EXOC7Q9UPT5 735 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
SNRNP35-202ENST00000412157 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 LGALS16A8MUM7 142 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 PPP1R37O75864 691 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 NR3C1P04150 777 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 LGALS2P05162 132 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 TPM1P09493 284 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 SMPD1P17405 629 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 NR2F2P24468 414 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 ADAM9Q13443 819 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 PLCB4Q15147 1175 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 MAN2A1Q16706 1144 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 FKBP15Q5T1M5 1219 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 TMEM63BQ5T3F8 832 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 HAUS6Q7Z4H7 955 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 TRIM50Q86XT4 487 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 ZC3H3Q8IXZ2 948 aaKnown RBP12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 AFG1LQ8WV93 481 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 SPIRE2Q8WWL2 714 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 NOC4LQ9BVI4 516 aaKnown RBP12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 GBP3Q9H0R5 595 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 CGNQ9P2M7 1197 aaKnown RBP12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 NRBP1Q9UHY1 535 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 GJD2Q9UKL4 321 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 ZMYM2Q9UBW7 1377 aa12.77□□□□□ -0.37
SNRNP35-202ENST00000412157 GPR25O00155 361 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 SLC16A4O15374 487 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 MMP3P08254 477 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 EPB41P11171 864 aaKnown RBP12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 SCP2P22307 547 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 DNM2P50570 870 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 LACTBP83111 547 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms