RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 PCDHB12Q9Y5F1 795 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 CCNT1O60563 726 aaKnown RBP25.08■■□□□ 1.61
MSH6-202ENST00000411819 GCFC2P16383 781 aaKnown RBP25.08■■□□□ 1.61
MSH6-202ENST00000411819 GTF2F1P35269 517 aaKnown RBP eCLIP25.08■■□□□ 1.614e-7■■■■■ 32.6
MSH6-202ENST00000411819 DRP2Q13474 957 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 CAMK1Q14012 370 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 TARBP2Q15633 366 aaKnown RBP25.08■■□□□ 1.61
MSH6-202ENST00000411819 CLUL1Q15846 466 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 ERICH6BQ5W0A0 696 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 OXER1Q8TDS5 423 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 WASF1Q92558 559 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 ELAC1Q9H777 363 aaKnown RBP25.08■■□□□ 1.61
MSH6-202ENST00000411819 CD320Q9NPF0 282 aa25.08■■□□□ 1.61
MSH6-202ENST00000411819 DDX11L8A8MPP1 907 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 MARCH6O60337 910 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 CTDNEP1O95476 244 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 DARSP14868 501 aaKnown RBP25.07■■□□□ 1.6
MSH6-202ENST00000411819 FGFR4P22455 802 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 IRS1P35568 1242 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 GJD3Q8N144 294 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 NECAB1Q8N987 351 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 RNF169Q8NCN4 708 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 NIFKQ9BYG3 293 aaKnown RBP25.07■■□□□ 1.6
MSH6-202ENST00000411819 EPHX3Q9H6B9 360 aa25.07■■□□□ 1.6
MSH6-202ENST00000411819 LTBRP36941 435 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 DNM2P50570 870 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 PSMC5P62195 406 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 PLA2G4FQ68DD2 849 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 PPP4R3AQ6IN85 833 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 THNSL1Q8IYQ7 743 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 ABI1Q8IZP0 508 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 KHSRPQ92945 711 aaKnown RBP eCLIP25.06■■□□□ 1.6
MSH6-202ENST00000411819 FAM20AQ96MK3 541 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 BRMS1Q9HCU9 246 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 KCNMB3Q9NPA1 279 aa25.06■■□□□ 1.6
MSH6-202ENST00000411819 TYW1Q9NV66 732 aaKnown RBP25.06■■□□□ 1.6
MSH6-202ENST00000411819 EML1O00423 815 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 LINC01565O15544 149 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 HOXA2O43364 376 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 STBD1O95210 358 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 LARGE1O95461 756 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 NDUFV1P49821 464 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 FAM189BP81408 668 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 DLX2Q07687 328 aaPredicted RBP25.05■■□□□ 1.6
MSH6-202ENST00000411819 PPP2R5CQ13362 524 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 CTC1Q2NKJ3 1217 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 ADGRD2Q7Z7M1 963 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 COLGALT1Q8NBJ5 622 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 NAP1L4Q99733 375 aaKnown RBP25.05■■□□□ 1.6
MSH6-202ENST00000411819 GCOM2Q9BZD3 368 aaPredicted RBP25.05■■□□□ 1.6
MSH6-202ENST00000411819 TMEM117Q9H0C3 514 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 VAV3Q9UKW4 847 aa25.05■■□□□ 1.6
MSH6-202ENST00000411819 TBX10O75333 385 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 CSDE1O75534 798 aaKnown RBP25.04■■□□□ 1.6
MSH6-202ENST00000411819 LAG3P18627 525 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 KRT2P35908 639 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 ME3Q16798 604 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 ANO5Q75V66 913 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 RBM23Q86U06 439 aaKnown RBP25.04■■□□□ 1.6
MSH6-202ENST00000411819 ECHDC2Q86YB7 292 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 POTEDQ86YR6 584 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 MICAL1Q8TDZ2 1067 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 GTF3C6Q969F1 213 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 PCDHGC5Q9Y5F6 944 aa25.04■■□□□ 1.6
MSH6-202ENST00000411819 A0A087WZ62 844 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 FAM205CA6NFA0 338 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 DKC1O60832 514 aaKnown RBP eCLIP25.03■■□□□ 1.6
MSH6-202ENST00000411819 FGF18O76093 207 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 QARSP47897 775 aaKnown RBP25.03■■□□□ 1.6
MSH6-202ENST00000411819 NRIP1P48552 1158 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 NR5A1Q13285 461 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 CSPP1Q1MSJ5 1256 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 EARS2Q5JPH6 523 aaKnown RBP25.03■■□□□ 1.6
MSH6-202ENST00000411819 RHPN2Q8IUC4 686 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 LRRC43Q8N309 656 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 CEP89Q96ST8 783 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 FDXACB1Q9BRP7 624 aaPredicted RBP25.03■■□□□ 1.6
MSH6-202ENST00000411819 CWH43Q9H720 699 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 TLR9Q9NR96 1032 aa25.03■■□□□ 1.6
MSH6-202ENST00000411819 SUCLA2Q9P2R7 463 aaPredicted RBP25.03■■□□□ 1.6
MSH6-202ENST00000411819 IGKV6-21A0A0C4DH24 114 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 EIF5BO60841 1220 aaKnown RBP25.02■■□□□ 1.6
MSH6-202ENST00000411819 MAFO75444 373 aaPredicted RBP25.02■■□□□ 1.6
MSH6-202ENST00000411819 SFPQP23246 707 aaKnown RBP eCLIP25.02■■□□□ 1.6
MSH6-202ENST00000411819 FOSBP53539 338 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 CDC42EP1Q00587 391 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 UBE3AQ05086 875 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 NCAPH2Q6IBW4 605 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 NLRP4Q96MN2 994 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 CASD1Q96PB1 797 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 JPH2Q9BR39 696 aaPredicted RBP25.02■■□□□ 1.6
MSH6-202ENST00000411819 RNF19AQ9NV58 838 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 DACT1Q9NYF0 836 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 RAPGEFL1Q9UHV5 662 aa25.02■■□□□ 1.6
MSH6-202ENST00000411819 TBX3O15119 743 aa25.01■■□□□ 1.59
MSH6-202ENST00000411819 FDPSP14324 419 aaKnown RBP25.01■■□□□ 1.59
MSH6-202ENST00000411819 NEK4P51957 841 aa25.01■■□□□ 1.59
MSH6-202ENST00000411819 ADAM15Q13444 863 aa25.01■■□□□ 1.59
MSH6-202ENST00000411819 ZNF410Q86VK4 478 aa25.01■■□□□ 1.59
MSH6-202ENST00000411819 HAS1Q92839 578 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms