RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 LRRC71Q8N4P6 559 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZNF668Q96K58 619 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZMYND12Q9H0C1 365 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ADAMTS10Q9H324 1103 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SPG21Q9NZD8 308 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ESYT2A0FGR8 921 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 HOXB8P17481 243 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 EIF4BP23588 611 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 PPM1AP35813 382 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 METAP2P50579 478 aaKnown RBP eCLIP16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 RCAN1P53805 252 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 TCF15Q12870 199 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 KRT32Q14532 448 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZBTB33Q86T24 672 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 LRRC43Q8N309 656 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ASIC4Q96FT7 647 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 NRBP2Q9NSY0 501 aa16.12■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
HLA-DQB2-229ENST00000411527 GNA11P29992 359 aa16.11■□□□□ 0.17
HLA-DQB2-229ENST00000411527 AVPR2P30518 371 aa16.11■□□□□ 0.17
HLA-DQB2-229ENST00000411527 VCPP55072 806 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB2-229ENST00000411527 LINC01465Q8N7H1 131 aa16.11■□□□□ 0.17
HLA-DQB2-229ENST00000411527 WDR64B1ANS9 1081 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 PRPF3O43395 683 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZNF862O60290 1169 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 OATP04181 439 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 HMGB1P09429 215 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CPA1P15085 419 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 FGFR4P22455 802 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SMC1AQ14683 1233 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 BMP2KLQ5H9B9 411 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZNF710Q8N1W2 664 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 MRPL43Q8N983 215 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 HELQQ8TDG4 1101 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CASP10Q92851 521 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SCLT1Q96NL6 688 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 DISC1Q9NRI5 854 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CDH22Q9UJ99 828 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 MYO10Q9HD67 2058 aa16.1■□□□□ 0.17
HLA-DQB2-229ENST00000411527 A0A0U1RQF3 1178 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 EOMESO95936 686 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CIITAP33076 1130 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CA8P35219 290 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 GPC3P51654 580 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 TPRNQ4KMQ1 711 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CES5AQ6NT32 575 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 Q6ZUG5 572 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SLC39A11Q8N1S5 342 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 LENG9Q96B70 501 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 FAM86C1Q9NVL1 165 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 HCFC2Q9Y5Z7 792 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZDBF2Q9HCK1 2354 aa16.09■□□□□ 0.17
HLA-DQB2-229ENST00000411527 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NT5C1B-RDH14C9J2C7 533 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MSH4O15457 936 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CHMP2AO43633 222 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CSDE1O75534 798 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 PDGFBP01127 241 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ALDH7A1P49419 539 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 PRKCEQ02156 737 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TBC1D8BQ0IIM8 1120 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ZNF598Q86UK7 904 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SKAP1Q86WV1 359 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 KREMEN2Q8NCW0 462 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NLRP7Q8WX94 980 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 BRF1Q92994 677 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 PHKBQ93100 1093 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ADAM7Q9H2U9 754 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 POMKQ9H5K3 350 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DACT1Q9NYF0 836 aa16.08■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ST18O60284 1047 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CLASP2O75122 1294 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CXCL14O95715 111 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 BCAR1P56945 870 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ITIH3Q06033 890 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 UGCGQ16739 394 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ATOH1Q92858 354 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NECTIN4Q96NY8 510 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 RIT2Q99578 217 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MRPL9Q9BYD2 267 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 IRF2BPLQ9H1B7 796 aa16.07■□□□□ 0.16
HLA-DQB2-229ENST00000411527 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 EDIL3O43854 480 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GAS7O60861 476 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 WEE2P0C1S8 567 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms