RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 ZC3H11AO75152 810 aaKnown RBP eCLIP17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 VTNP04004 478 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 KLRC2P26717 231 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 PDE1AP54750 535 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 LMNB2Q03252 620 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 CLLU1OSQ5K130 101 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 POTEGQ6S5H5 508 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 CYB5R4Q7L1T6 521 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 GPR152Q8TDT2 470 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 JADE2Q9NQC1 790 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 ARHGEF3Q9NR81 526 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
SYNGR1-205ENST00000406293 CHD6Q8TD26 2715 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 CTSAP10619 480 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 SRFP11831 508 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 KCNA4P22459 653 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 COL9A2Q14055 689 aaPredicted RBP17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 TRMT1LQ7Z2T5 733 aaKnown RBP17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 SLC44A3Q8N4M1 653 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 RRP36Q96EU6 259 aaKnown RBP17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 RTKNQ9BST9 563 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 MRPL9Q9BYD2 267 aaKnown RBP17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 FOXQ1Q9C009 403 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 SPATA6Q9NWH7 488 aaPredicted RBP17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 CHD8Q9HCK8 2581 aa17.34■□□□□ 0.37
SYNGR1-205ENST00000406293 ERICH2A1L162 156 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 SPDYE3A6NKU9 549 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 PIK3CDO00329 1044 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 MAFGO15525 162 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 LAMTOR5O43504 91 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 IGHDP01880 384 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 SSBP05455 408 aaKnown RBP eCLIP17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 ADRB1P08588 477 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 SDSP20132 328 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 PTPN14Q15678 1187 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 UBE2SQ16763 222 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 PHLDB3Q6NSJ2 640 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 DCLRE1AQ6PJP8 1040 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 ATRIPQ8WXE1 791 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 STAMQ92783 540 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 EMILIN2Q9BXX0 1053 aa17.33■□□□□ 0.36
SYNGR1-205ENST00000406293 DDX39AO00148 427 aaKnown RBP17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 SPTLC1O15269 473 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 LRRN2O75325 713 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 MYBP10242 640 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 FAM160B1Q5W0V3 765 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 TMEM173Q86WV6 379 aaPredicted RBP17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 TICAM2Q86XR7 235 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 DLGAP2Q9P1A6 1054 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 DENND4AQ7Z401 1863 aa17.32■□□□□ 0.36
SYNGR1-205ENST00000406293 CFAP47Q6ZTR5 3102 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 N4BP1O75113 896 aaKnown RBP17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 SLC26A2P50443 739 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 CSTF1Q05048 431 aaKnown RBP17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 TRDNQ13061 729 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 COL9A3Q14050 684 aaPredicted RBP17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 PDXDC2PQ6P474 469 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 C15orf39Q6ZRI6 1047 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 ST13P5Q8NFI4 369 aaPredicted RBP17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 PJA1Q8NG27 643 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 ZNF668Q96K58 619 aaPredicted RBP17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 KLHL5Q96PQ7 755 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 KCNH7Q9NS40 1196 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 SMG5Q9UPR3 1016 aaKnown RBP17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 AKT3Q9Y243 479 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 IRAK3Q9Y616 596 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 CACNA1IQ9P0X4 2223 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 LAMA4Q16363 1823 aa17.31■□□□□ 0.36
SYNGR1-205ENST00000406293 GPR32O75388 356 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 GLULP15104 373 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 NLRP11P59045 1033 aaKnown RBP17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 WTAPQ15007 396 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 LONRF3Q496Y0 759 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 PPM1JQ5JR12 505 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 IGSF21Q96ID5 467 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 SCLT1Q96NL6 688 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 MYADMQ96S97 322 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 BCO2Q9BYV7 579 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 GBP3Q9H0R5 595 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 PCDHA6Q9UN73 950 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 PCDHA8Q9Y5H6 950 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 ATRXP46100 2492 aa17.3■□□□□ 0.36
SYNGR1-205ENST00000406293 COL1A2P08123 1366 aa17.29■□□□□ 0.36
SYNGR1-205ENST00000406293 CCDC195A0A1B0GUA6 201 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms