RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 IL13P35225 146 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 NEK2P51955 445 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 SRSF2Q01130 221 aaKnown RBP6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 KCNA10Q16322 511 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 VMACQ2NL98 169 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 SAPCD2Q86UD0 394 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 JDP2Q8WYK2 163 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 ACAP3Q96P50 834 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 WRNIP1Q96S55 665 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 MTG2Q9H4K7 406 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 KCNG1Q9UIX4 513 aa6.66□□□□□ -1.34
HMGB3P19-201ENST00000403971 ST20-MTHFSA0A0A6YYL1 179 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 FFAR3O14843 346 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 PFKMP08237 780 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 CELA3BP08861 270 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 HMGB1P09429 215 aaKnown RBP6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 ZNF28P17035 718 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 RPL13P26373 211 aaKnown RBP6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 ANTXR2P58335 489 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 MCL1Q07820 350 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 TRIM25Q14258 630 aaKnown RBP6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 UGT8Q16880 541 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 TOR2AQ5JU69 321 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 DPP8Q6V1X1 898 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 LYSMD2Q8IV50 215 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 NUDT10Q8NFP7 164 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 RPGRQ92834 1020 aaKnown RBP6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 DACT3Q96B18 629 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 NUDT11Q96G61 164 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 FAXDC2Q96IV6 333 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 CDC42EP3Q9UKI2 254 aa6.65□□□□□ -1.34
HMGB3P19-201ENST00000403971 MYPNQ86TC9 1320 aa6.65□□□□□ -1.35
HMGB3P19-201ENST00000403971 ERICH3Q5RHP9 1530 aa6.65□□□□□ -1.35
HMGB3P19-201ENST00000403971 CUL7Q14999 1698 aa6.65□□□□□ -1.35
HMGB3P19-201ENST00000403971 SHTN1A0MZ66 631 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 H0Y858 1186 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA12O60330 932 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 RAP1GAPP47736 663 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 CLUL1Q15846 466 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 ZNF385BQ569K4 471 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 OTOP2Q7RTS6 562 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 ZBTB46Q86UZ6 589 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 SPATA25Q9BR10 227 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 KCTD10Q9H3F6 313 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 DNAJC28Q9NX36 388 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 MKS1Q9NXB0 559 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 DENND2AQ9ULE3 1009 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 USP18Q9UMW8 372 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA9Q9Y5G4 932 aaKnown RBP6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA8Q9Y5G5 932 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA7Q9Y5G6 932 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA6Q9Y5G7 932 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA3Q9Y5H0 932 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 PCDHGA2Q9Y5H1 932 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 GAPVD1Q14C86 1478 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 RUSC2Q8N2Y8 1516 aa6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 EIF4G3O43432 1585 aaKnown RBP6.64□□□□□ -1.35
HMGB3P19-201ENST00000403971 RFXAPO00287 272 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 OPHN1O60890 802 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 KIF21BO75037 1637 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 CYP7B1O75881 506 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 KLHL18O94889 574 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 OSMP13725 252 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 AFF3P51826 1226 aaKnown RBP6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 LGALS4P56470 323 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 BCAR1P56945 870 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 NFATC3Q12968 1075 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 GRAMD4Q6IC98 578 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 TTLL7Q6ZT98 887 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 CXXC5Q7LFL8 322 aaKnown RBP6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 AMOTL1Q8IY63 956 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 BCL6BQ8N143 479 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 OR5AN1Q8NGI8 311 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 CHMP4CQ96CF2 233 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 NOL10Q9BSC4 688 aaKnown RBP6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 PITHD1Q9GZP4 211 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 AASDHPPTQ9NRN7 309 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 FTSJ1Q9UET6 329 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 NUMBLQ9Y6R0 609 aa6.63□□□□□ -1.35
HMGB3P19-201ENST00000403971 A0A0A6YYJ9 748 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 TRIM75PA6NK02 468 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 RBP3P10745 1247 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 RAB27AP51159 221 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 STAT5BP51692 787 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 KCNQ1P51787 676 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 PPARAQ07869 468 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 ODF1Q14990 250 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 RGL3Q3MIN7 710 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 MCTP2Q6DN12 878 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 SLC41A1Q8IVJ1 513 aa6.62□□□□□ -1.35
HMGB3P19-201ENST00000403971 TP53I13Q8NBR0 393 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms