RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 CDC25AP30304 524 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 CD52P31358 61 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 NASPP49321 788 aaPredicted RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 WDR5P61964 334 aaKnown RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 CEBPZQ03701 1054 aaKnown RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 STK38Q15208 465 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 ECM1Q16610 540 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 FOXD4L5Q5VV16 416 aaPredicted RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 RHPN2Q8IUC4 686 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 MCPH1Q8NEM0 835 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 FOXD4L4Q8WXT5 416 aaPredicted RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 CALML4Q96GE6 196 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 OSMRQ99650 979 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 MMTAG2Q9BU76 263 aaKnown RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 SEMA6BQ9H3T3 888 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 AGO3Q9H9G7 860 aaKnown RBP15.09■□□□□ 0.01
SNED1-203ENST00000401644 MSRAQ9UJ68 235 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 PADI3Q9ULW8 664 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 MYH15Q9Y2K3 1946 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 TTC3P53804 2025 aa15.09■□□□□ 0.01
SNED1-203ENST00000401644 A0A087WWV3 80 aa15.08■□□□□ 0
SNED1-203ENST00000401644 PP2D1A8MPX8 630 aa15.08■□□□□ 0
SNED1-203ENST00000401644 EYA4O95677 639 aa15.08■□□□□ 0
SNED1-203ENST00000401644 DARSP14868 501 aaKnown RBP15.08■□□□□ 0
SNED1-203ENST00000401644 MARCKSP29966 332 aaPredicted RBP15.08■□□□□ 0
SNED1-203ENST00000401644 PBX2P40425 430 aa15.08■□□□□ 0
SNED1-203ENST00000401644 NFX1Q12986 1120 aaKnown RBP15.08■□□□□ 0
SNED1-203ENST00000401644 DRP2Q13474 957 aa15.08■□□□□ 0
SNED1-203ENST00000401644 RAB30Q15771 203 aa15.08■□□□□ 0
SNED1-203ENST00000401644 TCTN1Q2MV58 587 aa15.08■□□□□ 0
SNED1-203ENST00000401644 PADI6Q6TGC4 694 aa15.08■□□□□ 0
SNED1-203ENST00000401644 CABP7Q86V35 215 aa15.08■□□□□ 0
SNED1-203ENST00000401644 PRPF31Q8WWY3 499 aaKnown RBP15.08■□□□□ 0
SNED1-203ENST00000401644 TMEM143Q96AN5 459 aa15.08■□□□□ 0
SNED1-203ENST00000401644 PPP1R16BQ96T49 567 aa15.08■□□□□ 0
SNED1-203ENST00000401644 PBX4Q9BYU1 374 aa15.08■□□□□ 0
SNED1-203ENST00000401644 ERVK-5Q9HDB9 667 aa15.08■□□□□ 0
SNED1-203ENST00000401644 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
SNED1-203ENST00000401644 CFAP45Q9UL16 551 aa15.08■□□□□ 0
SNED1-203ENST00000401644 ST3GAL5Q9UNP4 418 aa15.08■□□□□ 0
SNED1-203ENST00000401644 NOC2LQ9Y3T9 749 aaKnown RBP15.08■□□□□ 0
SNED1-203ENST00000401644 ATP6V1DQ9Y5K8 247 aa15.08■□□□□ 0
SNED1-203ENST00000401644 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
SNED1-203ENST00000401644 ENPP3O14638 875 aa15.07■□□□□ 0
SNED1-203ENST00000401644 USO1O60763 962 aaKnown RBP15.07■□□□□ 0
SNED1-203ENST00000401644 PPP6R2O75170 966 aa15.07■□□□□ 0
SNED1-203ENST00000401644 YEATS4O95619 227 aa15.07■□□□□ 0
SNED1-203ENST00000401644 BRD1O95696 1058 aa15.07■□□□□ 0
SNED1-203ENST00000401644 CYP11B2P19099 503 aa15.07■□□□□ 0
SNED1-203ENST00000401644 DNAJB2P25686 324 aa15.07■□□□□ 0
SNED1-203ENST00000401644 ARL2P36404 184 aa15.07■□□□□ 0
SNED1-203ENST00000401644 POU5F1BQ06416 359 aa15.07■□□□□ 0
SNED1-203ENST00000401644 LAMTOR4Q0VGL1 99 aa15.07■□□□□ 0
SNED1-203ENST00000401644 PKP1Q13835 747 aa15.07■□□□□ 0
SNED1-203ENST00000401644 TFDP1Q14186 410 aa15.07■□□□□ 0
SNED1-203ENST00000401644 ZRSR1Q15695 479 aaKnown RBP15.07■□□□□ 0
SNED1-203ENST00000401644 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
SNED1-203ENST00000401644 HERC6Q8IVU3 1022 aa15.07■□□□□ 0
SNED1-203ENST00000401644 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
SNED1-203ENST00000401644 LINC00301Q8NCQ3 95 aa15.07■□□□□ 0
SNED1-203ENST00000401644 TMEM40Q8WWA1 233 aa15.07■□□□□ 0
SNED1-203ENST00000401644 CCSER1Q9C0I3 900 aa15.07■□□□□ 0
SNED1-203ENST00000401644 BHMT2Q9H2M3 363 aa15.07■□□□□ 0
SNED1-203ENST00000401644 TTYH1Q9H313 450 aaPredicted RBP15.07■□□□□ 0
SNED1-203ENST00000401644 XPNPEP1Q9NQW7 623 aa15.07■□□□□ 0
SNED1-203ENST00000401644 TFIP11Q9UBB9 837 aaKnown RBP15.07■□□□□ 0
SNED1-203ENST00000401644 FBXO2Q9UK22 296 aaPredicted RBP15.07■□□□□ 0
SNED1-203ENST00000401644 PCDHA11Q9Y5I1 949 aa15.07■□□□□ 0
SNED1-203ENST00000401644 TMEM265A0A087WTH1 108 aa15.06■□□□□ 0
SNED1-203ENST00000401644 A0A087WZ62 844 aa15.06■□□□□ 0
SNED1-203ENST00000401644 SPTLC2O15270 562 aa15.06■□□□□ 0
SNED1-203ENST00000401644 SFPQP23246 707 aaKnown RBP eCLIP15.06■□□□□ 0
SNED1-203ENST00000401644 FAM228AQ86W67 206 aa15.06■□□□□ 0
SNED1-203ENST00000401644 TOP1MTQ969P6 601 aa15.06■□□□□ 0
SNED1-203ENST00000401644 TIFAQ96CG3 184 aa15.06■□□□□ 0
SNED1-203ENST00000401644 NLRP4Q96MN2 994 aa15.06■□□□□ 0
SNED1-203ENST00000401644 GUCD1Q96NT3 240 aa15.06■□□□□ 0
SNED1-203ENST00000401644 FDXACB1Q9BRP7 624 aaPredicted RBP15.06■□□□□ 0
SNED1-203ENST00000401644 ZBED2Q9BTP6 218 aa15.06■□□□□ 0
SNED1-203ENST00000401644 CSRNP2Q9H175 543 aa15.06■□□□□ 0
SNED1-203ENST00000401644 TSPYL2Q9H2G4 693 aaPredicted RBP15.06■□□□□ 0
SNED1-203ENST00000401644 BMP2KQ9NSY1 1161 aaPredicted RBP15.06■□□□□ 0
SNED1-203ENST00000401644 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
SNED1-203ENST00000401644 CCDC39Q9UFE4 941 aa15.06■□□□□ 0
SNED1-203ENST00000401644 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.05■□□□□ -0
SNED1-203ENST00000401644 E9PMD0 336 aa15.05■□□□□ -0
SNED1-203ENST00000401644 SRGAP2CP0DJJ0 459 aa15.05■□□□□ -0
SNED1-203ENST00000401644 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
SNED1-203ENST00000401644 TXLNAP40222 546 aa15.05■□□□□ -0
SNED1-203ENST00000401644 PHKA2P46019 1235 aa15.05■□□□□ -0
SNED1-203ENST00000401644 RABGGTBP53611 331 aa15.05■□□□□ -0
SNED1-203ENST00000401644 NUCB2P80303 420 aa15.05■□□□□ -0
SNED1-203ENST00000401644 DEFB103AP81534 67 aa15.05■□□□□ -0
SNED1-203ENST00000401644 GRIN1Q05586 938 aa15.05■□□□□ -0
SNED1-203ENST00000401644 GRB10Q13322 594 aa15.05■□□□□ -0
SNED1-203ENST00000401644 PCBP1Q15365 356 aaKnown RBP eCLIP15.05■□□□□ -0
SNED1-203ENST00000401644 TMEM119Q4V9L6 283 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms