RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 RNF169Q8NCN4 708 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 TBC1D22BQ9NU19 505 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
LINC00544-201ENST00000400540 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 SAMM50Q9Y512 469 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 PCDHA10Q9Y5I2 948 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 NID2Q14112 1375 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 ESYT2A0FGR8 921 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 EDIL3O43854 480 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 PDGFBP01127 241 aaPredicted RBP13.49□□□□□ -0.25
LINC00544-201ENST00000400540 PTPN5P54829 565 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 PRKCEQ02156 737 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 PTPN21Q16825 1174 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 PDE12Q6L8Q7 609 aaKnown RBP13.49□□□□□ -0.25
LINC00544-201ENST00000400540 TMEM184AQ6ZMB5 413 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 Q6ZUG5 572 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 LRRC43Q8N309 656 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 PHKBQ93100 1093 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 GJA10Q969M2 543 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 C6orf50Q9HD87 102 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 FAM86C1Q9NVL1 165 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 TCEAL9Q9UHQ7 104 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
LINC00544-201ENST00000400540 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 MSH4O15457 936 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 CHMP2AO43633 222 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 CSDE1O75534 798 aaKnown RBP13.48□□□□□ -0.25
LINC00544-201ENST00000400540 OATP04181 439 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 SRGAP2BP0DMP2 458 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
LINC00544-201ENST00000400540 GPC3P51654 580 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 RCAN1P53805 252 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 DRP2Q13474 957 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 BRF1Q92994 677 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 FAM167AQ96KS9 214 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
LINC00544-201ENST00000400540 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 WDR64B1ANS9 1081 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 NT5C1B-RDH14C9J2C7 533 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 MAGEB2O15479 319 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 HOXA2O43364 376 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
LINC00544-201ENST00000400540 CIITAP33076 1130 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 PPM1AP35813 382 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 FGD1P98174 961 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 KRT32Q14532 448 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 FAM43BQ6ZT52 329 aaPredicted RBP13.47□□□□□ -0.25
LINC00544-201ENST00000400540 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
LINC00544-201ENST00000400540 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 UNC45AQ9H3U1 944 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 SMOC2Q9H3U7 446 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 POMKQ9H5K3 350 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 NGRNQ9NPE2 291 aaKnown RBP13.47□□□□□ -0.25
LINC00544-201ENST00000400540 DISC1Q9NRI5 854 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 VPS54Q9P1Q0 977 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 PUF60Q9UHX1 559 aaKnown RBP13.47□□□□□ -0.25
LINC00544-201ENST00000400540 HCFC2Q9Y5Z7 792 aa13.47□□□□□ -0.25
LINC00544-201ENST00000400540 TDRD15B5MCY1 1934 aaKnown RBP13.47□□□□□ -0.25
LINC00544-201ENST00000400540 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.25
LINC00544-201ENST00000400540 WEE2P0C1S8 567 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 DARSP14868 501 aaKnown RBP13.46□□□□□ -0.25
LINC00544-201ENST00000400540 TMOD1P28289 359 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 CA8P35219 290 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 KRT17Q04695 432 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
LINC00544-201ENST00000400540 KANK3Q6NY19 840 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 TMEM173Q86WV6 379 aaPredicted RBP13.46□□□□□ -0.25
LINC00544-201ENST00000400540 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
LINC00544-201ENST00000400540 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
LINC00544-201ENST00000400540 SCLT1Q96NL6 688 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 SH2D3AQ9BRG2 576 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 WDR87Q6ZQQ6 2873 aa13.46□□□□□ -0.25
LINC00544-201ENST00000400540 A0A0U1RQF3 1178 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 CCDC196A0A1B0GTZ2 297 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 C2CD4DB7Z1M9 353 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
LINC00544-201ENST00000400540 HMGB1P09429 215 aaKnown RBP13.45□□□□□ -0.26
LINC00544-201ENST00000400540 GNA11P29992 359 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 AVPR2P30518 371 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 BCAR1P56945 870 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 NTRK3Q16288 839 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 MTERF2Q49AM1 385 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 MCTP2Q6DN12 878 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 C12orf76Q8N812 135 aaPredicted RBP13.45□□□□□ -0.26
LINC00544-201ENST00000400540 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms